RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 NEUROG3Q9Y4Z2 214 aa16.7■□□□□ 0.26
GCDH-213ENST00000590627 RAI2Q9Y5P3 530 aa16.7■□□□□ 0.26
GCDH-213ENST00000590627 WASF2Q9Y6W5 498 aa16.7■□□□□ 0.26
GCDH-213ENST00000590627 ZZEF1O43149 2961 aa16.7■□□□□ 0.26
GCDH-213ENST00000590627 TRAFD1O14545 582 aaPredicted RBP16.69■□□□□ 0.26
GCDH-213ENST00000590627 FZD6O60353 706 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 PMPCBO75439 489 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 TMEM63AO94886 807 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 TRIM16O95361 564 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 EPHX1P07099 455 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 LMAN1P49257 510 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 SIM1P81133 766 aaPredicted RBP16.69■□□□□ 0.26
GCDH-213ENST00000590627 SARNPP82979 210 aaKnown RBP16.69■□□□□ 0.26
GCDH-213ENST00000590627 CDK18Q07002 472 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 BCL2L1Q07817 233 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 SYCP2LQ5T4T6 812 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 NAPEPLDQ6IQ20 393 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 LINC00523Q86TU6 105 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 RYBPQ8N488 228 aaPredicted RBP16.69■□□□□ 0.26
GCDH-213ENST00000590627 MINDY1Q8N5J2 469 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 ZNF366Q8N895 744 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 TMIEQ8NEW7 156 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 IPMKQ8NFU5 416 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 OR6K2Q8NGY2 324 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 HCAR2Q8TDS4 363 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 OR8D1Q8WZ84 308 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 FOXJ1Q92949 421 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 HSPA12BQ96MM6 686 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 TRIB3Q96RU7 358 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 FAM129BQ96TA1 746 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 TDRD1Q9BXT4 1180 aaKnown RBP16.69■□□□□ 0.26
GCDH-213ENST00000590627 OSBPL1AQ9BXW6 950 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 FOXP3Q9BZS1 431 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 FBRSQ9HAH7 460 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 ARNT2Q9HBZ2 717 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 DNAAF2Q9NVR5 837 aaKnown RBP16.69■□□□□ 0.26
GCDH-213ENST00000590627 IL36AQ9UHA7 158 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 AKAP13Q12802 2813 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 WDFY3Q8IZQ1 3526 aa16.69■□□□□ 0.26
GCDH-213ENST00000590627 AP3B1O00203 1094 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 NDUFS2O75306 463 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 PRLP01236 227 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 PRNPP04156 253 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 MLNP12872 115 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 MCM3P25205 808 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 SERPINA4P29622 427 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 ECHS1P30084 290 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 CARSP49589 748 aaKnown RBP16.68■□□□□ 0.26
GCDH-213ENST00000590627 PLTPP55058 493 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 RPL26P61254 145 aaKnown RBP16.68■□□□□ 0.26
GCDH-213ENST00000590627 TRAF2Q12933 501 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 SLC14A1Q13336 389 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 NAA30Q147X3 362 aaPredicted RBP16.68■□□□□ 0.26
GCDH-213ENST00000590627 STARD3Q14849 445 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 WDR45BQ5MNZ6 344 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 DENND5AQ6IQ26 1287 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 LRRC8BQ6P9F7 803 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 PPP1R21Q6ZMI0 780 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 DSG4Q86SJ6 1040 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 CAMK1DQ8IU85 385 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 STK40Q8N2I9 435 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 ZCCHC9Q8N567 271 aaKnown RBP16.68■□□□□ 0.26
GCDH-213ENST00000590627 FBXO25Q8TCJ0 367 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 IFT81Q8WYA0 676 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.68■□□□□ 0.26
GCDH-213ENST00000590627 ECHDC3Q96DC8 303 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 TBL1YQ9BQ87 522 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 PARD6BQ9BYG5 372 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 SUV39H2Q9H5I1 410 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 ZDHHC6Q9H6R6 413 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 XAB2Q9HCS7 855 aaKnown RBP16.68■□□□□ 0.26
GCDH-213ENST00000590627 CASS4Q9NQ75 786 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 FSCN3Q9NQT6 498 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 RAB21Q9UL25 225 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 PPM1HQ9ULR3 514 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 RPL26L1Q9UNX3 145 aaKnown RBP16.68■□□□□ 0.26
GCDH-213ENST00000590627 PCDHGC4Q9Y5F7 938 aa16.68■□□□□ 0.26
GCDH-213ENST00000590627 A0A1W2PQ67 120 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 TSPAN11A1L157 253 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 BNIP3LO60238 219 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 SYNCRIPO60506 623 aaKnown RBP16.67■□□□□ 0.26
GCDH-213ENST00000590627 PPFIA2O75334 1257 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 LEFTY1O75610 366 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 PGLSO95336 258 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 NDST3O95803 873 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 AGTP01019 485 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 CTSLP07711 333 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 GNSP15586 552 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 HLA-DPA1P20036 260 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 CD6P30203 668 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 GKP32189 559 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 TERF1P54274 439 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 SPARCL1Q14515 664 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 KIAA1324Q6UXG2 1013 aaKnown RBP16.67■□□□□ 0.26
GCDH-213ENST00000590627 GDPD4Q6W3E5 623 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 CCNI2Q6ZMN8 369 aaPredicted RBP16.67■□□□□ 0.26
GCDH-213ENST00000590627 ZNF534Q76KX8 674 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 CAND1Q86VP6 1230 aaKnown RBP16.67■□□□□ 0.26
GCDH-213ENST00000590627 RGL4Q8IZJ4 473 aa16.67■□□□□ 0.26
GCDH-213ENST00000590627 IFT43Q96FT9 208 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms