RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 FAM160A2Q8N612 972 aaPredicted RBP12.09□□□□□ -0.47
APOC1-206ENST00000590334 BBOF1Q8ND07 529 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 LRRN4CLQ8ND94 238 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 OR52K1Q8NGK4 314 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 ASB12Q8WXK4 309 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 SMIM14Q96QK8 99 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 C19orf43Q9BQ61 176 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 APOL2Q9BQE5 337 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 FRMD8Q9BZ67 464 aaPredicted RBP12.09□□□□□ -0.47
APOC1-206ENST00000590334 KCNH6Q9H252 994 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 GRHL1Q9NZI5 618 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 ZFR2Q9UPR6 939 aaKnown RBP12.09□□□□□ -0.47
APOC1-206ENST00000590334 SHOC2Q9UQ13 582 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 SPO11Q9Y5K1 396 aa12.09□□□□□ -0.47
APOC1-206ENST00000590334 CUL9Q8IWT3 2517 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 LAMA1P25391 3075 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 PLXNB3Q9ULL4 1909 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3DA0A087WVF3 549 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3IA0A087WXS9 549 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3EA0A087X179 549 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3KA0A087X1G2 549 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3FA6NER0 549 aaPredicted RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3LB9A6J9 549 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 HRO43593 1189 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 RNGTTO60942 597 aaKnown RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3HP0C7X1 549 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 BCKDHBP21953 392 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 MAGEA3P43357 314 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 NPY2RP49146 381 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 LIG3P49916 1009 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 ITGA8P53708 1063 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 RPS21P63220 83 aaKnown RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 SLC7A5Q01650 507 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 PTSQ03393 145 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 CNGA3Q16281 694 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3GQ6DHY5 549 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3CQ6IPX1 549 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 PPP1R21Q6ZMI0 780 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TMC3Q7Z5M5 1100 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TSPAN33Q86UF1 283 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 CAND1Q86VP6 1230 aaKnown RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 HORMAD1Q86X24 394 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TBC1D3Q8IZP1 549 aaPredicted RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 TTC30BQ8N4P2 665 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 DNAAF3Q8N9W5 541 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 BRSK1Q8TDC3 778 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 ZC3H10Q96K80 434 aaKnown RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 COQ10AQ96MF6 247 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 RANBP9Q96S59 729 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 GPR174Q9BXC1 333 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 C1QTNF2Q9BXJ5 285 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 TRIM31Q9BZY9 425 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 DUSP15Q9H1R2 295 aaPredicted RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 C6orf106Q9H6K1 298 aaPredicted RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 XAB2Q9HCS7 855 aaKnown RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 DMGDHQ9UI17 866 aaKnown RBP12.08□□□□□ -0.48
APOC1-206ENST00000590334 ANAPC5Q9UJX4 755 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 INVSQ9Y283 1065 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 SNX24Q9Y343 169 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 ZNF711Q9Y462 761 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 SPAG17Q6Q759 2223 aa12.08□□□□□ -0.48
APOC1-206ENST00000590334 C1orf232A0A0U1RR37 186 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 A0A1W2PQU0 124 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 METTL12A8MUP2 240 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 NEMP1O14524 444 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 NDUFS2O75306 463 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 PCDH8O95206 1070 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 CLDN7O95471 211 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 IGHV4-34P06331 123 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 ELFN1P0C7U0 828 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 PIRTP0C851 137 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 C6P13671 934 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 GM2AP17900 193 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 PSMA3P25788 255 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 HMGCLP35914 325 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 NUDT1P36639 197 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 STC1P52823 247 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 PPP2CBP62714 309 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 PPP2CAP67775 309 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 SEMG2Q02383 582 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 CAV1Q03135 178 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 CALCOCO2Q13137 446 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 ARHGEF7Q14155 803 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 TAF1AQ15573 450 aaPredicted RBP12.07□□□□□ -0.48
APOC1-206ENST00000590334 ZNF284Q2VY69 593 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 LRRC66Q68CR7 880 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 KIAA0895LQ68EN5 471 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 LYSMD3Q7Z3D4 306 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 CYP2U1Q7Z449 544 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 PRSS33Q8NF86 280 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 CXorf40AQ8TE69 158 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 ART4Q93070 314 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 EID2BQ96D98 161 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 SERPINB12Q96P63 405 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 WRAP53Q9BUR4 548 aaKnown RBP12.07□□□□□ -0.48
APOC1-206ENST00000590334 FAM129AQ9BZQ8 928 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 DPH5Q9H2P9 285 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 ZFYVE1Q9HBF4 777 aa12.07□□□□□ -0.48
APOC1-206ENST00000590334 RRAGDQ9NQL2 400 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms