RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-208	ENST00000589165	PSMD11	O00231	422 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	CST8	O60676	142 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	PDHA1	P08559	390 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	HOXC4	P09017	264 aa	Predicted RBP	13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	JUND	P17535	347 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	CKMT2	P17540	419 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	SPINK2	P20155	84 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	TGM2	P21980	687 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	CA4	P22748	312 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	TRIM23	P36406	574 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	DYNLT1	P63172	113 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	NIPAL4	Q0D2K0	466 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	AP1B1	Q10567	949 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	ZBTB17	Q13105	803 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	CNGA3	Q16281	694 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	PPP2R5E	Q16537	467 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	ZNF542P	Q5EBM4	170 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	NPNT	Q6UXI9	565 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	TXLNB	Q8N3L3	684 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	CNTD1	Q8N815	330 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	SPC24	Q8NBT2	197 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	ACRBP	Q8NEB7	543 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	RBM41	Q96IZ5	413 aa	Known RBP	13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	APOO	Q9BUR5	198 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	TTLL3	Q9Y4R7	772 aa		13.9	□□□□□ -0.18
ERCC1-208	ENST00000589165	LRRK1	Q38SD2	2015 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	hCG_1818297	A0A087WSY0	165 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165		A0A0J9YYE9	177 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165		A8MX80	341 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	SIGLEC6	O43699	453 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	PRL	P01236	227 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	TRBC1	P01850	177 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	MMP2	P08253	660 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	ALPPL2	P10696	532 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	LHCGR	P22888	699 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	HTR1B	P28222	390 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	CTNNA1	P35221	906 aa	Known RBP	13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	MARCKSL1	P49006	195 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	ACADVL	P49748	655 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	ADCY2	Q08462	1091 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	ILK	Q13418	452 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	NFATC4	Q14934	902 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	ACOX1	Q15067	660 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	PRKD1	Q15139	912 aa	Predicted RBP	13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	ESRP1	Q6NXG1	681 aa	Known RBP	13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	LRRC57	Q8N9N7	239 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	FAM181A	Q8N9Y4	354 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	PLA2G15	Q8NCC3	412 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	ATL2	Q8NHH9	583 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	KIAA1524	Q8TCG1	905 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	KRT35	Q92764	455 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	LYSMD1	Q96S90	227 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	DUSP23	Q9BVJ7	150 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	SPAST	Q9UBP0	616 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	KLK13	Q9UKR3	277 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	PCDHA3	Q9Y5H8	950 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	IGF2R	P11717	2491 aa		13.89	□□□□□ -0.19
ERCC1-208	ENST00000589165	GOLGA8CP	A6NN73	597 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	GOLGA6L6	A8MZA4	724 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165		K7ESM1	405 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	TPP1	O14773	563 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	AQP9	O43315	295 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	PCCB	P05166	539 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	ACP1	P24666	158 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	HNF1B	P35680	557 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	BLK	P51451	505 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	NAP1L1	P55209	391 aa	Known RBP	13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	KIAA1024L	P59773	190 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	COPS2	P61201	443 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	SKOR1	P84550	965 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	PPARD	Q03181	441 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	DNAJC3	Q13217	504 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	SMAD1	Q15797	465 aa	Known RBP	13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	TMPRSS7	Q7RTY8	843 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	RAVER1	Q8IY67	606 aa	Known RBP	13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	PHACTR4	Q8IZ21	702 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	P3H4	Q92791	437 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	GATA6	Q92908	595 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	DTD2	Q96FN9	168 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	CAAP1	Q9H8G2	361 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	USP29	Q9HBJ7	922 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	PCDH9	Q9HC56	1237 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	SAE1	Q9UBE0	346 aa	Predicted RBP	13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	APOBEC3B	Q9UH17	382 aa	Known RBP	13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	DNPEP	Q9ULA0	475 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	EFR3B	Q9Y2G0	817 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	OR1A2	Q9Y585	309 aa		13.88	□□□□□ -0.19
ERCC1-208	ENST00000589165	CCDC66	A2RUB6	948 aa		13.87	□□□□□ -0.19
ERCC1-208	ENST00000589165	FFAR2	O15552	330 aa		13.87	□□□□□ -0.19
ERCC1-208	ENST00000589165	MTSS1	O43312	755 aa		13.87	□□□□□ -0.19
ERCC1-208	ENST00000589165	RFPL3	O75679	317 aa		13.87	□□□□□ -0.19
ERCC1-208	ENST00000589165	PTMA	P06454	111 aa	Known RBP	13.87	□□□□□ -0.19
ERCC1-208	ENST00000589165	ALPI	P09923	528 aa		13.87	□□□□□ -0.19
ERCC1-208	ENST00000589165	CKMT1A	P12532	417 aa		13.87	□□□□□ -0.19
ERCC1-208	ENST00000589165	PECAM1	P16284	738 aa	Predicted RBP	13.87	□□□□□ -0.19
ERCC1-208	ENST00000589165	ZNF30	P17039	623 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms