RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 SHROOM3Q8TF72 1996 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 K7ESM1 405 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 TAF4O00268 1085 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 MFSD11O43934 449 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 CSF2P04141 144 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 GIMD1P0DJR0 217 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 NME1P15531 152 aaKnown RBP11.61□□□□□ -0.55
RFX1-204ENST00000588885 MAN1A1P33908 653 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 SERPINB6P35237 376 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 MMP12P39900 470 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 MARCKSL1P49006 195 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 SUOXP51687 545 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 AP1S1P61966 158 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 HNRNPKP61978 463 aaKnown RBP eCLIP11.61□□□□□ -0.55
RFX1-204ENST00000588885 CYP4F3Q08477 520 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 INPP5AQ14642 412 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 PTPRRQ15256 657 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 DEFB133Q30KQ1 61 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 ANKRD20A8PQ5CZ79 823 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 DNTTIP2Q5QJE6 756 aaKnown RBP11.61□□□□□ -0.55
RFX1-204ENST00000588885 FAM182AQ5T1J6 154 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 HES3Q5TGS1 186 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 MEI1Q5TIA1 1274 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 MARC1Q5VT66 337 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 DENND2CQ68D51 928 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 PEX26Q7Z412 305 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 NT5DC3Q86UY8 548 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 PLA2G15Q8NCC3 412 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 OR4C6Q8NH72 309 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 RAPGEF5Q92565 580 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 TSACCQ96A04 125 aaPredicted RBP11.61□□□□□ -0.55
RFX1-204ENST00000588885 IFT43Q96FT9 208 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 CALR3Q96L12 384 aaKnown RBP11.61□□□□□ -0.55
RFX1-204ENST00000588885 APOLD1Q96LR9 279 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 ZNF599Q96NL3 588 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 TLR10Q9BXR5 811 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 NT5MQ9NPB1 228 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 GPR27Q9NS67 375 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 PCDHGA1Q9Y5H4 931 aa11.61□□□□□ -0.55
RFX1-204ENST00000588885 ANKRD11Q6UB99 2663 aaPredicted RBP11.61□□□□□ -0.55
RFX1-204ENST00000588885 CPED1A4D0V7 1026 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 NEMP2A6NFY4 417 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 H3BM21 787 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 TRAFD1O14545 582 aaPredicted RBP11.6□□□□□ -0.55
RFX1-204ENST00000588885 DDX3YO15523 660 aaKnown RBP11.6□□□□□ -0.55
RFX1-204ENST00000588885 AQP9O43315 295 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 SPOPO43791 374 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 GCATO75600 419 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 RECQL5O94762 991 aaPredicted RBP11.6□□□□□ -0.55
RFX1-204ENST00000588885 TUBB4AP04350 444 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 KRT7P08729 469 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 C1SP09871 688 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 ALPPL2P10696 532 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 PYGBP11216 843 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 MMP13P45452 471 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 POLR2LP62875 67 aaKnown RBP11.6□□□□□ -0.55
RFX1-204ENST00000588885 RALGDSQ12967 914 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 TARDBPQ13148 414 aaKnown RBP eCLIP11.6□□□□□ -0.55
RFX1-204ENST00000588885 PTK2BQ14289 1009 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 ACOX1Q15067 660 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 PRRT3Q5FWE3 981 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 NCBP2-AS2Q69YL0 99 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 C19orf48Q6RUI8 117 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 TMPRSS12Q86WS5 348 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 PROSER1Q86XN7 944 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 HID1Q8IV36 788 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 MAP7D3Q8IWC1 876 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 PHACTR4Q8IZ21 702 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 BBS5Q8N3I7 341 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 FAM71BQ8TC56 605 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 KRT35Q92764 455 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 ECHDC3Q96DC8 303 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 SMIM14Q96QK8 99 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 NUDCD1Q96RS6 583 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 NLGN3Q9NZ94 848 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 B4GALT6Q9UBX8 382 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 AMFRQ9UKV5 643 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 TTLL3Q9Y4R7 772 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 ALG6Q9Y672 507 aa11.6□□□□□ -0.55
RFX1-204ENST00000588885 COL5A1P20908 1838 aaPredicted RBP11.6□□□□□ -0.55
RFX1-204ENST00000588885 URB1O60287 2271 aaKnown RBP11.6□□□□□ -0.55
RFX1-204ENST00000588885 CHD5Q8TDI0 1954 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 ARID1BQ8NFD5 2236 aaPredicted RBP11.59□□□□□ -0.55
RFX1-204ENST00000588885 PKD1L2Q7Z442 2459 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 A0A0U1RQS6 177 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.59□□□□□ -0.55
RFX1-204ENST00000588885 LRRD1A4D1F6 860 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CPP00450 1065 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CAPNS1P04632 268 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CELA2BP08218 269 aaPredicted RBP11.59□□□□□ -0.55
RFX1-204ENST00000588885 ELFN1P0C7U0 828 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CTPS1P17812 591 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CR2P20023 1033 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 KDELR1P24390 212 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 ACP1P24666 158 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CTNNA2P26232 953 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 HNF1BP35680 557 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 GARSP41250 739 aaKnown RBP11.59□□□□□ -0.55
RFX1-204ENST00000588885 YPEL5P62699 121 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms