RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 FAF2Q96CS3 445 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 IFT43Q96FT9 208 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 MRFAP1L1Q96HT8 127 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 PANX2Q96RD6 677 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 IL12RB2Q99665 862 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 APOOQ9BUR5 198 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 POLR1EQ9GZS1 481 aaKnown RBP8.88□□□□□ -0.99
SDF2-207ENST00000588472 LUC7LQ9NQ29 371 aaKnown RBP8.88□□□□□ -0.99
SDF2-207ENST00000588472 HAUS2Q9NVX0 235 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 DDX56Q9NY93 547 aaKnown RBP8.88□□□□□ -0.99
SDF2-207ENST00000588472 SAE1Q9UBE0 346 aaPredicted RBP8.88□□□□□ -0.99
SDF2-207ENST00000588472 APOBEC3BQ9UH17 382 aaKnown RBP8.88□□□□□ -0.99
SDF2-207ENST00000588472 PNMA8BQ9ULN7 279 aaPredicted RBP8.88□□□□□ -0.99
SDF2-207ENST00000588472 PHTF1Q9UMS5 762 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 DOLKQ9UPQ8 538 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 CHKBQ9Y259 395 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 ALG6Q9Y672 507 aa8.88□□□□□ -0.99
SDF2-207ENST00000588472 EPN1Q9Y6I3 576 aaPredicted RBP8.88□□□□□ -0.99
SDF2-207ENST00000588472 A0A1W2PQ67 120 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 CPED1A4D0V7 1026 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 FAM221BA6H8Z2 402 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 NPIPB15A6NHN6 443 aaPredicted RBP8.87□□□□□ -0.99
SDF2-207ENST00000588472 C3orf70A6NLC5 250 aaPredicted RBP8.87□□□□□ -0.99
SDF2-207ENST00000588472 HTRA2O43464 458 aaPredicted RBP8.87□□□□□ -0.99
SDF2-207ENST00000588472 GCATO75600 419 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 NDUFA10O95299 355 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 IPO7O95373 1038 aaKnown RBP8.87□□□□□ -0.99
SDF2-207ENST00000588472 HLA-DQB2P05538 268 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 CELA2BP08218 269 aaPredicted RBP8.87□□□□□ -0.99
SDF2-207ENST00000588472 CYP2A6P11509 494 aaPredicted RBP8.87□□□□□ -0.99
SDF2-207ENST00000588472 HTR1BP28222 390 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 HNF1BP35680 557 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 ETV3P41162 512 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 CD86P42081 329 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 NIPAL4Q0D2K0 466 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 ARHGEF7Q14155 803 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 NFATC4Q14934 902 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 CNGA3Q16281 694 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 CDKN3Q16667 212 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 ALG11Q2TAA5 492 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 COL28A1Q2UY09 1125 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 CCNI2Q6ZMN8 369 aaPredicted RBP8.87□□□□□ -0.99
SDF2-207ENST00000588472 MACC1Q6ZN28 852 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 RFLNAQ6ZTI6 216 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 USP45Q70EL2 814 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 TMPRSS7Q7RTY8 843 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 HSD11B1LQ7Z5J1 315 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 DAAM2Q86T65 1068 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 TMTC1Q8IUR5 882 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 NDUFAF2Q8N183 169 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 GALNT15Q8N3T1 639 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 PLD5Q8N7P1 536 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 ACRBPQ8NEB7 543 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 BTN2A2Q8WVV5 523 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 MAML1Q92585 1016 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 HAUS1Q96CS2 278 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 NUS1Q96E22 293 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 APOLD1Q96LR9 279 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 AGAP3Q96P47 875 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 TSGA13Q96PP4 275 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 MRPL40Q9NQ50 206 aaKnown RBP8.87□□□□□ -0.99
SDF2-207ENST00000588472 GPR27Q9NS67 375 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 NLGN3Q9NZ94 848 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 SIRPGQ9P1W8 387 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 SPASTQ9UBP0 616 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 GULP1Q9UBP9 304 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 CD84Q9UIB8 345 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 DUSP10Q9Y6W6 482 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 LRRK1Q38SD2 2015 aa8.87□□□□□ -0.99
SDF2-207ENST00000588472 RCCD1A6NED2 376 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 TRABD2BA6NFA1 517 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 TMEM202A6NGA9 273 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 F5H423 210 aaPredicted RBP8.86□□□□□ -0.99
SDF2-207ENST00000588472 CACNB4O00305 520 aaPredicted RBP8.86□□□□□ -0.99
SDF2-207ENST00000588472 PPP1R12AO14974 1030 aaPredicted RBP8.86□□□□□ -0.99
SDF2-207ENST00000588472 YY2O15391 372 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 CST8O60676 142 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 HEXIM1O94992 359 aaKnown RBP8.86□□□□□ -0.99
SDF2-207ENST00000588472 ZRANB2O95218 330 aaKnown RBP eCLIP8.86□□□□□ -0.99
SDF2-207ENST00000588472 RASGRP1O95267 797 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 LCA5LO95447 670 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 TNFP01375 233 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 ANXA6P08133 673 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 GIMD1P0DJR0 217 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 TSHRP16473 764 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 ZFXP17010 805 aaPredicted RBP8.86□□□□□ -0.99
SDF2-207ENST00000588472 GM2AP17900 193 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 LHCGRP22888 699 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 NFKBIAP25963 317 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 MARCKSL1P49006 195 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 PEX5P50542 639 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 SRP54P61011 504 aaKnown RBP8.86□□□□□ -0.99
SDF2-207ENST00000588472 PPIDQ08752 370 aaKnown RBP8.86□□□□□ -0.99
SDF2-207ENST00000588472 ZBTB17Q13105 803 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 TARDBPQ13148 414 aaKnown RBP eCLIP8.86□□□□□ -0.99
SDF2-207ENST00000588472 IHHQ14623 411 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 PDK1Q15118 436 aa8.86□□□□□ -0.99
SDF2-207ENST00000588472 SMAD1Q15797 465 aaKnown RBP8.86□□□□□ -0.99
SDF2-207ENST00000588472 PCSK7Q16549 785 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms