RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 LMBRD1Q9NUN5 540 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 LRIT1Q9P2V4 623 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 RNF215Q9Y6U7 377 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 SCN8AQ9UQD0 1980 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 NOBOXO60393 691 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 GLB1P16278 677 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 ERCC2P18074 760 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 CSNK1DP48730 415 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 POLR2LP62875 67 aaKnown RBP16.86■□□□□ 0.29
LINC01842-201ENST00000588275 MAMLD1Q13495 774 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 MAP9Q49MG5 647 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 C14orf28Q4W4Y0 310 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 SPECC1LQ69YQ0 1117 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 USP53Q70EK8 1073 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 DPPA4Q7L190 304 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 PRICKLE2Q7Z3G6 844 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 SPRED1Q7Z699 444 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 ARHGAP12Q8IWW6 846 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 NPWQ8N729 165 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 PDCD6IPQ8WUM4 868 aaKnown RBP16.86■□□□□ 0.29
LINC01842-201ENST00000588275 ERGIC2Q96RQ1 377 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 LGR4Q9BXB1 951 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 PARVAQ9NVD7 372 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 ANO10Q9NW15 660 aa16.86■□□□□ 0.29
LINC01842-201ENST00000588275 AHCTF1Q8WYP5 2266 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 PRAMEF33A0A0G2JMD5 474 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 TTC24A2A3L6 582 aaPredicted RBP16.85■□□□□ 0.29
LINC01842-201ENST00000588275 CFAP69A5D8W1 941 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 GOLGA6CA6NDK9 693 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 GOLGA6BA6NDN3 693 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 PRPSAP2O60256 369 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 PRAMEF10O60809 474 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 RNF8O76064 485 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 GOLGA6DP0CG33 693 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 LIPCP11150 499 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 IL10RBQ08334 325 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 ZNF235Q14590 738 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 STX1AQ16623 288 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 AMZ1Q400G9 498 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 VASH2Q86V25 355 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 PELI3Q8N2H9 469 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 ECHDC3Q96DC8 303 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 NUS1Q96E22 293 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 ARHGAP9Q9BRR9 750 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 CARS2Q9HA77 564 aaKnown RBP16.85■□□□□ 0.29
LINC01842-201ENST00000588275 GOLGA6AQ9NYA3 693 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 B4GALT6Q9UBX8 382 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 APPL1Q9UKG1 709 aa16.85■□□□□ 0.29
LINC01842-201ENST00000588275 PRSS38A1L453 326 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 EIF3CLB5ME19 914 aaKnown RBP16.84■□□□□ 0.29
LINC01842-201ENST00000588275 EFSO43281 561 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 GM2AP17900 193 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 ETV5P41161 510 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 MAZP56270 477 aaKnown RBP16.84■□□□□ 0.29
LINC01842-201ENST00000588275 AP1S1P61966 158 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 NFATC3Q12968 1075 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 BIRC2Q13490 618 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 HLTFQ14527 1009 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC01842-201ENST00000588275 RFTN1Q14699 578 aaPredicted RBP16.84■□□□□ 0.29
LINC01842-201ENST00000588275 LBRQ14739 615 aaKnown RBP16.84■□□□□ 0.29
LINC01842-201ENST00000588275 MANEAQ5SRI9 462 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 AFMIDQ63HM1 303 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 PNCKQ6P2M8 343 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 OGFOD3Q6PK18 319 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 TP53INP2Q8IXH6 220 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 ARFGAP1Q8N6T3 406 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 KIAA1524Q8TCG1 905 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 SGF29Q96ES7 293 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 EIF3CQ99613 913 aaKnown RBP16.84■□□□□ 0.29
LINC01842-201ENST00000588275 CMKLR1Q99788 373 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 TRIM7Q9C029 511 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 RDH14Q9HBH5 336 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 SEPT10Q9P0V9 454 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 SEPT3Q9UH03 358 aa16.84■□□□□ 0.29
LINC01842-201ENST00000588275 ARHGEF17Q96PE2 2063 aaPredicted RBP16.84■□□□□ 0.29
LINC01842-201ENST00000588275 PDE2AO00408 941 aaPredicted RBP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 TRAFD1O14545 582 aaPredicted RBP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 TNFRSF10CO14798 259 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 NVLO15381 856 aaKnown RBP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 CPP00450 1065 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 MYCLP1P12525 358 aaPredicted RBP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 PNLIPP16233 465 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 MIPP30301 263 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 RENBPP51606 427 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 NSUN2Q08J23 767 aaKnown RBP eCLIP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 SLC10A7Q0GE19 358 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 CNGA3Q16281 694 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 TSR1Q2NL82 804 aaKnown RBP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 TMCO4Q5TGY1 634 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 PLEKHA7Q6IQ23 1121 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 PPP1R2P3Q6NXS1 205 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 RBM43Q6ZSC3 357 aaKnown RBP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 TMPRSS9Q7Z410 1059 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 HEATR4Q86WZ0 1026 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 ZFAND4Q86XD8 727 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 EXTL1Q92935 676 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 USP7Q93009 1102 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 NSMCE3Q96MG7 304 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 FAM117AQ9C073 453 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 SEMA6CQ9H3T2 930 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms