RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SLC7A5Q01650 507 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 PTSQ03393 145 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 SIM2Q14190 667 aaPredicted RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 TPSAB1Q15661 275 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 LPAL2Q16609 132 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 ZNF284Q2VY69 593 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 TMEM259Q4ZIN3 620 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 RNASEH2BQ5TBB1 312 aaKnown RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 LRRC66Q68CR7 880 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 DENND2CQ68D51 928 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 NAPEPLDQ6IQ20 393 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 CCDC70Q6NSX1 233 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 NEK5Q6P3R8 708 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 PRR23BQ6ZRT6 265 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 RFLNAQ6ZTI6 216 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 ZNF534Q76KX8 674 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 CEP68Q76N32 757 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 ARMCX6Q7L4S7 300 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 LYSMD3Q7Z3D4 306 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 MAATS1Q7Z4T9 603 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 HSD11B1LQ7Z5J1 315 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 TRIM69Q86WT6 500 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 HORMAD1Q86X24 394 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 NDUFAF2Q8N183 169 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 CBARPQ8N350 705 aaPredicted RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 MMGT1Q8N4V1 131 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 CEP112Q8N8E3 955 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 NAT8LQ8N9F0 302 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 MNS1Q8NEH6 495 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 CADM4Q8NFZ8 388 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 CXorf40AQ8TE69 158 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 LRRC45Q96CN5 670 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 LYSMD1Q96S90 227 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 ORAI3Q9BRQ5 295 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 LRRC1Q9BTT6 524 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 MAGEE1Q9HCI5 957 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 CASS4Q9NQ75 786 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 EIF2B3Q9NR50 452 aaKnown RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 FAM86C1Q9NVL1 165 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 TPX2Q9ULW0 747 aaKnown RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 SNX24Q9Y343 169 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 SLCO1B1Q9Y6L6 691 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 MYLKQ15746 1914 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 C1orf232A0A0U1RR37 186 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 EFCAB8A8MWE9 144 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 GOLGA8MH3BSY2 632 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 TP73O15350 636 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 LATO43561 262 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 PAK4O96013 591 aaPredicted RBP10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 ELFN1P0C7U0 828 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 C6P13671 934 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 CCR5P51681 352 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 PTPN5P54829 565 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 RPS21P63220 83 aaKnown RBP10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 MTM1Q13496 603 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 PTPRCAPQ14761 206 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 TRADDQ15628 312 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 IZUMO3Q5VZ72 239 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 DUPD1Q68J44 220 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 KIAA1161Q6NSJ0 714 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 PPP1R21Q6ZMI0 780 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 LPCAT2Q7L5N7 544 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 LINC00523Q86TU6 105 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 C11orf74Q86VG3 221 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 CCHCR1Q8TD31 782 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 BLOC1S5Q8TDH9 187 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 SNX19Q92543 992 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 ATOH1Q92858 354 aaPredicted RBP10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 ZC3H10Q96K80 434 aaKnown RBP10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 COQ10AQ96MF6 247 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 HSPA12BQ96MM6 686 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 ERP44Q9BS26 406 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 C1QTNF2Q9BXJ5 285 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 SLC17A9Q9BYT1 436 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 DPH5Q9H2P9 285 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 FZD3Q9NPG1 666 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 RAPGEFL1Q9UHV5 662 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 EIF2B4Q9UI10 523 aaKnown RBP10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 ZNF711Q9Y462 761 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 KCTD3Q9Y597 815 aa10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 TNRC6BQ9UPQ9 1833 aaKnown RBP10.72□□□□□ -0.69
SMARCA4-213ENST00000587988 A0A1W2PPC4 97 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 WNT9AO14904 365 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 RAD51BO15315 384 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 SLC31A1O15431 190 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 BUD23O43709 281 aaKnown RBP10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 LZTS3O60299 673 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 PLXNA2O75051 1894 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 AVILO75366 819 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 TM7SF2O76062 418 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 RECQL5O94762 991 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 SLC4A1P02730 911 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ZNF30P17039 623 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ITPKAP23677 461 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 NFKBIAP25963 317 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ETV3P41162 512 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 DHPSP49366 369 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 STC1P52823 247 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ITGA8P53708 1063 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms