RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 AGAP3Q96P47 875 aa13.34□□□□□ -0.27
SMARCA4-210ENST00000586892 OSBPL8Q9BZF1 889 aa13.34□□□□□ -0.27
SMARCA4-210ENST00000586892 PCDH9Q9HC56 1237 aa13.34□□□□□ -0.27
SMARCA4-210ENST00000586892 DNPEPQ9ULA0 475 aa13.34□□□□□ -0.27
SMARCA4-210ENST00000586892 A0A0J9YYE9 177 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 NPIPB15A6NHN6 443 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 A8MX80 341 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 H3BM21 787 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 TJP3O95049 919 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 TRBC1P01850 177 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 CSF2P04141 144 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 MMP2P08253 660 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 CCDC175P0C221 793 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 NME1P15531 152 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 PTPN3P26045 913 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 HNRNPKP61978 463 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 SKOR1P84550 965 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 BNIP3Q12983 259 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 XRCC4Q13426 336 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 MTM1Q13496 603 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 ARHGEF7Q14155 803 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 IHHQ14623 411 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 ACOX1Q15067 660 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 SLC14A2Q15849 920 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 CNGA3Q16281 694 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 MACC1Q6ZN28 852 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 KANSL1Q7Z3B3 1105 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 ZC3H18Q86VM9 953 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 HAUS1Q96CS2 278 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 IMP4Q96G21 291 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 TEKT5Q96M29 485 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 COQ10AQ96MF6 247 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 QKIQ96PU8 341 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 VAT1Q99536 393 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 ADGRE3Q9BY15 652 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 CEP41Q9BYV8 373 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 SLC25A51Q9H1U9 297 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 DNAJC28Q9NX36 388 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 GUCA1BQ9UMX6 200 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 CHKBQ9Y259 395 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 CAPN6Q9Y6Q1 641 aa13.33□□□□□ -0.28
SMARCA4-210ENST00000586892 CAPN8A6NHC0 703 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 TNFSF14O43557 240 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 SDC3O75056 442 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 PIAS2O75928 621 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 TRIM16O95361 564 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 FTCDO95954 541 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 PRLP01236 227 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 PCCBP05166 539 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 ALPIP09923 528 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 PYGMP11217 842 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 ZNF30P17039 623 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 CTPS1P17812 591 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 GM2AP17900 193 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 LHCGRP22888 699 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 DGKAP23743 735 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 HTR1BP28222 390 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 PMLP29590 882 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 HNF1BP35680 557 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 WASHC5Q12768 1159 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 INPP5AQ14642 412 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 NOMO1Q15155 1222 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 ESRP1Q6NXG1 681 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 KDM7AQ6ZMT4 941 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 ZNF662Q6ZS27 426 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 B4GALNT4Q76KP1 1039 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 CBARPQ8N350 705 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 BTN2A2Q8WVV5 523 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 HTR3CQ8WXA8 447 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 NUS1Q96E22 293 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 HES6Q96HZ4 224 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 LYSMD1Q96S90 227 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 RBM15Q96T37 977 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 FERMT1Q9BQL6 677 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 APOOQ9BUR5 198 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 FTSJ1Q9UET6 329 aa13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 PACSIN2Q9UNF0 486 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 APOBEC2Q9Y235 224 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 GOLGA4Q13439 2230 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-210ENST00000586892 NEMP2A6NFY4 417 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 ANKRD66B4E2M5 251 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 DDX3YO15523 660 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 ZNF189O75820 626 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 FTH1P19P0C7X4 201 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 CCZ1BP86790 482 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 CCZ1P86791 482 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 OTUD4Q01804 1114 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 NFATC4Q14934 902 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 HS1BP3Q53T59 392 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 ZNF542PQ5EBM4 170 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 TPRG1LQ5T0D9 272 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 LRRC66Q68CR7 880 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 DENND2CQ68D51 928 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 CRTC1Q6UUV9 634 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 TSPAN33Q86UF1 283 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 RAVER1Q8IY67 606 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 SLC25A45Q8N413 288 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 EID2Q8N6I1 236 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 LPCAT1Q8NF37 534 aa13.31□□□□□ -0.28
SMARCA4-210ENST00000586892 ATL2Q8NHH9 583 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms