RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 LINC00303Q3SY05 128 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 AMZ1Q400G9 498 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 PPP6R3Q5H9R7 873 aaPredicted RBP20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 PHF19Q5T6S3 580 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 PNCKQ6P2M8 343 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 IRF2BP2Q7Z5L9 587 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 VASH2Q86V25 355 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 ARHGAP12Q8IWW6 846 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 EXTL1Q92935 676 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 TRIM7Q9C029 511 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 SEMA6CQ9H3T2 930 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 SP110Q9HB58 689 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 SPATS2LQ9NUQ6 558 aaKnown RBP20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 DONSONQ9NYP3 566 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 APPL1Q9UKG1 709 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 PCDHGA7Q9Y5G6 932 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 ASH1LQ9NR48 2969 aaKnown RBP20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 UNC13CQ8NB66 2214 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 PRAMEF33A0A0G2JMD5 474 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 B4GAT1O43505 415 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 PRAMEF10O60809 474 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 CCKBRP32239 447 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 OR1D5P58170 312 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 EIF3IQ13347 325 aaKnown RBP20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 PTPRRQ15256 657 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 C14orf28Q4W4Y0 310 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 CERCAMQ5T4B2 595 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 AFMIDQ63HM1 303 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 SPECC1LQ69YQ0 1117 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 RFX8Q6ZV50 586 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 PRICKLE2Q7Z3G6 844 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 ANKRD20A12PQ8NF67 263 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 PDCD6IPQ8WUM4 868 aaKnown RBP20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 JPH3Q8WXH2 748 aaPredicted RBP20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 SNRNP25Q9BV90 132 aaKnown RBP20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 RDH14Q9HBH5 336 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 PCDHGC4Q9Y5F7 938 aa20.17■□□□□ 0.82
CLPTM1-204ENST00000585961 LRRK1Q38SD2 2015 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 CFAP69A5D8W1 941 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 NVLO15381 856 aaKnown RBP20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 FUCA1P04066 466 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 DESP17661 470 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 ALDH4A1P30038 563 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 TRIM23P36406 574 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 MAZP56270 477 aaKnown RBP20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 KIAA1024LP59773 190 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 POLR2LP62875 67 aaKnown RBP20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 CYP4F2P78329 520 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 NFKB2Q00653 900 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 KCNC4Q03721 635 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 NSUN2Q08J23 767 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 HLTFQ14527 1009 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 DPPA4Q7L190 304 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 SPRED1Q7Z699 444 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 NPWQ8N729 165 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 COL26A1Q96A83 441 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 ECHDC3Q96DC8 303 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 SGF29Q96ES7 293 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 ARHGAP9Q9BRR9 750 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 PARVAQ9NVD7 372 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 FOXJ2Q9P0K8 574 aa20.16■□□□□ 0.82
CLPTM1-204ENST00000585961 TRAFD1O14545 582 aaPredicted RBP20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 FERP16591 822 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 KELP23276 732 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 MIPP30301 263 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 HTR7P34969 479 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 B4GALNT1Q00973 533 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 IL10RBQ08334 325 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 SLC10A7Q0GE19 358 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 MANEAQ5SRI9 462 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 SASS6Q6UVJ0 657 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 ERGIC2Q96RQ1 377 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 WDR26Q9H7D7 661 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 CARS2Q9HA77 564 aaKnown RBP20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 CWC15Q9P013 229 aaKnown RBP20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 B4GALT6Q9UBX8 382 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 COL6A6A6NMZ7 2263 aa20.15■□□□□ 0.82
CLPTM1-204ENST00000585961 A0A0U1RQS6 177 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 PRSS38A1L453 326 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 GOLGA6CA6NDK9 693 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 GOLGA6BA6NDN3 693 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 LRRC10BA6NIK2 292 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 TNFRSF10CO14798 259 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 RNF8O76064 485 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 FGF1P05230 155 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 HOXC4P09017 264 aaPredicted RBP20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 GOLGA6DP0CG33 693 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 AK4P27144 223 aaPredicted RBP20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 POLD2P49005 469 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 LBRQ14739 615 aaKnown RBP20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 NRROSQ86YC3 692 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 PTCD2Q8WV60 388 aaKnown RBP20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 CMKLR1Q99788 373 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 TRIM4Q9C037 500 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 GOLGA6AQ9NYA3 693 aa20.14■□□□□ 0.81
CLPTM1-204ENST00000585961 TMEM191CA6NGB0 347 aa20.13■□□□□ 0.81
CLPTM1-204ENST00000585961 CYSRT1A8MQ03 144 aa20.13■□□□□ 0.81
CLPTM1-204ENST00000585961 RHPN2P1A8MT19 583 aa20.13■□□□□ 0.81
CLPTM1-204ENST00000585961 C9orf172C9J069 976 aa20.13■□□□□ 0.81
CLPTM1-204ENST00000585961 PRPSAP2O60256 369 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms