RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 TPRG1LQ5T0D9 272 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 MFSD7Q6UXD7 560 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 LIPIQ6XZB0 460 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 PEX26Q7Z412 305 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 PTAR1Q7Z6K3 402 aaPredicted RBP8.68□□□□□ -1.02
ATG4D-202ENST00000585437 PARGQ86W56 976 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 GATAD2AQ86YP4 633 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 KATNAL2Q8IYT4 538 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 BBS5Q8N3I7 341 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 LRRC57Q8N9N7 239 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 SPATA4Q8NEY3 305 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 TPCN2Q8NHX9 752 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 CXorf40AQ8TE69 158 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 ADAMTS14Q8WXS8 1223 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 MCCC1Q96RQ3 725 aaPredicted RBP8.68□□□□□ -1.02
ATG4D-202ENST00000585437 IL12RB2Q99665 862 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 CDC6Q99741 560 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 RHOXF2Q9BQY4 288 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 WRAP53Q9BUR4 548 aaKnown RBP8.68□□□□□ -1.02
ATG4D-202ENST00000585437 TMEM121BQ9BXQ6 578 aaPredicted RBP8.68□□□□□ -1.02
ATG4D-202ENST00000585437 POLR1EQ9GZS1 481 aaKnown RBP8.68□□□□□ -1.02
ATG4D-202ENST00000585437 ANGPTL2Q9UKU9 493 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 AMFRQ9UKV5 643 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 PPIL1Q9Y3C6 166 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 PCDHGC4Q9Y5F7 938 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 ALG6Q9Y672 507 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 FREM2Q5SZK8 3169 aa8.68□□□□□ -1.02
ATG4D-202ENST00000585437 USP24Q9UPU5 2620 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 MIF4GDA9UHW6 222 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 SPOPO43791 374 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 MMP20O60882 483 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 PIAS2O75928 621 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 PGLSO95336 258 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 FTCDO95954 541 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 CPP00450 1065 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 HLA-DQB2P05538 268 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 GIMD1P0DJR0 217 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 TPRP12270 2363 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 CCNB1P14635 433 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 KCNA4P22459 653 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 LHCGRP22888 699 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 CTNNA1P35221 906 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 MAP1BP46821 2468 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 LIG3P49916 1009 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 YPEL5P62699 121 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 POLR2LP62875 67 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 BNIP3Q12983 259 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 SGCGQ13326 291 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 IRF4Q15306 451 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 PPP2R5EQ16537 467 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 GLIPR1L2Q4G1C9 344 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 CFAP58Q5T655 872 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 C8orf74Q6P047 294 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 ERAP2Q6P179 960 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 KDM7AQ6ZMT4 941 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 SPOCD1Q6ZMY3 1216 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 Q6ZSR6 202 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 HDXQ7Z353 690 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 DAAM2Q86T65 1068 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 SLCO6A1Q86UG4 719 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 CCDC13Q8IYE1 715 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 CBARPQ8N350 705 aaPredicted RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 SLC25A45Q8N413 288 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 NOA1Q8NC60 698 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 ARRDC2Q8TBH0 407 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 RHBDD1Q8TEB9 315 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 SETD7Q8WTS6 366 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 COG1Q8WTW3 980 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 NSMCE1Q8WV22 266 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 TBATAQ96M53 351 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 COQ10AQ96MF6 247 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 NAP1L3Q99457 506 aaPredicted RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 LGMNQ99538 433 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 SEMA3CQ99985 751 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 C1QTNF7Q9BXJ2 289 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 TDRD1Q9BXT4 1180 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 NT5MQ9NPB1 228 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 SCUBE2Q9NQ36 999 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 MBNL1Q9NR56 388 aaKnown RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 PNMA8BQ9ULN7 279 aaPredicted RBP8.67□□□□□ -1.02
ATG4D-202ENST00000585437 PHTF1Q9UMS5 762 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 COQ6Q9Y2Z9 468 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 NEUROG3Q9Y4Z2 214 aa8.67□□□□□ -1.02
ATG4D-202ENST00000585437 hCG_1818297A0A087WSY0 165 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 NPIPB15A6NHN6 443 aaPredicted RBP8.66□□□□□ -1.02
ATG4D-202ENST00000585437 CCDC188H7C350 402 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 PSMD11O00231 422 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 PGRMC1O00264 195 aaKnown RBP8.66□□□□□ -1.02
ATG4D-202ENST00000585437 APOL1O14791 398 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 ZNF185O15231 689 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 TNFSF14O43557 240 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 PRLP01236 227 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 CSF2P04141 144 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 PRKCGP05129 697 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 ITGAVP06756 1048 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 MMP2P08253 660 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 PDHA1P08559 390 aa8.66□□□□□ -1.02
ATG4D-202ENST00000585437 ATXN1LP0C7T5 689 aaKnown RBP8.66□□□□□ -1.02
ATG4D-202ENST00000585437 ELFN1P0C7U0 828 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms