RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ISCUQ9H1K1 167 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 WDR26Q9H7D7 661 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 CPNE5Q9HCH3 593 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 EPB41L5Q9HCM4 733 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 RABGEF1Q9UJ41 708 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 LRP4O75096 1905 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 COL27A1Q8IZC6 1860 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-219ENST00000584887 CCDC187A0A096LP49 1063 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 GOLGA6CA6NDK9 693 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 GOLGA6BA6NDN3 693 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 B4DGG1 531 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 ATXN7O15265 892 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-219ENST00000584887 TNFSF15O95150 251 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 RPLP0P05388 317 aaKnown RBP20.49■□□□□ 0.87
TOP3A-219ENST00000584887 GOLGA6DP0CG33 693 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 RARAP10276 462 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 KELP23276 732 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 PDX1P52945 283 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 TMPRSS3P57727 454 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 CCL7P80098 99 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 PIGHQ14442 188 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-219ENST00000584887 KRT81Q14533 505 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 NR1I3Q14994 352 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 IQCB1Q15051 598 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 TXNRD3NBQ6F5E7 133 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 Q8N9G6 341 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-219ENST00000584887 FAM46DQ8NEK8 389 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 NSMCE1Q8WV22 266 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 CPLX3Q8WVH0 158 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 NUS1Q96E22 293 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 SLC46A1Q96NT5 459 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 RBM15Q96T37 977 aaKnown RBP eCLIP20.49■□□□□ 0.87
TOP3A-219ENST00000584887 FOXP3Q9BZS1 431 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 THAP2Q9H0W7 228 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 CYP4F12Q9HCS2 524 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 GOLGA6AQ9NYA3 693 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 ANAPC7Q9UJX3 599 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 DGKBQ9Y6T7 804 aa20.49■□□□□ 0.87
TOP3A-219ENST00000584887 TEX51A0A1B0GUA7 166 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 GM2AP17900 193 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 VIPR1P32241 457 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 GJC1P36383 396 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 HSPA9P38646 679 aaKnown RBP20.48■□□□□ 0.87
TOP3A-219ENST00000584887 UCNP55089 124 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 MAXP61244 160 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 FANCCQ00597 558 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 NFKBIBQ15653 356 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 ARHGAP40Q5TG30 622 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 B3GNT8Q7Z7M8 397 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 LUZP1Q86V48 1076 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 PELI3Q8N2H9 469 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 PGBD5Q8N414 524 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 ARL14Q8N4G2 192 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 NUDCD1Q96RS6 583 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 NUP85Q9BW27 656 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 LGR4Q9BXB1 951 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 TMEM168Q9H0V1 697 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 NOD2Q9HC29 1040 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 PCDH18Q9HCL0 1135 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 PCDHGA8Q9Y5G5 932 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 LOC400499M0QZD8 3231 aa20.48■□□□□ 0.87
TOP3A-219ENST00000584887 D6RAR5 112 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 AGRPO00253 132 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 NTN3O00634 580 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-219ENST00000584887 SOCS5O75159 536 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 SERPINB6P35237 376 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 MMP13P45452 471 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 CNGA3Q16281 694 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 FIGNQ5HY92 759 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 HGSNATQ68CP4 663 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 PNCKQ6P2M8 343 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 CCNJLQ8IV13 435 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 PRR11Q96HE9 360 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-219ENST00000584887 CBX8Q9HC52 389 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 IP6K2Q9UHH9 426 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 BZW2Q9Y6E2 419 aaKnown RBP20.47■□□□□ 0.87
TOP3A-219ENST00000584887 UNC13CQ8NB66 2214 aa20.47■□□□□ 0.87
TOP3A-219ENST00000584887 SYCE3A1L190 88 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 HTRA2O43464 458 aaPredicted RBP20.46■□□□□ 0.87
TOP3A-219ENST00000584887 MAFKO60675 156 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 PEX11BO96011 259 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 CYP2A6P11509 494 aaPredicted RBP20.46■□□□□ 0.87
TOP3A-219ENST00000584887 NFKBIAP25963 317 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 CDH6P55285 790 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 TRAF2Q12933 501 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 TAF1BQ53T94 588 aaPredicted RBP20.46■□□□□ 0.87
TOP3A-219ENST00000584887 IGF2-ASQ6U949 168 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 JAMLQ86YT9 394 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 SFTPA2Q8IWL1 248 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 CCL4L1Q8NHW4 92 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 TEKT4Q8WW24 435 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 COQ10AQ96MF6 247 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 MGME1Q9BQP7 344 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 FUCA2Q9BTY2 467 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 DPH1Q9BZG8 443 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 STRADBQ9C0K7 418 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 LRRN3Q9H3W5 708 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 DPEP2Q9H4A9 486 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 NT5MQ9NPB1 228 aa20.46■□□□□ 0.87
TOP3A-219ENST00000584887 PHPT1Q9NRX4 125 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms