RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ACOX1Q15067 660 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 LY6KQ17RY6 165 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 GK5Q6ZS86 529 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 CENPNQ96H22 339 aaPredicted RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 PURBQ96QR8 312 aaKnown RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 UXTQ9UBK9 157 aaPredicted RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF43-208ENST00000584437 ARHGEF33A8MVX0 844 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 BCKDKO14874 412 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 CASKO14936 926 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 FADS2O95864 444 aaKnown RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 NR2F1P10589 423 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 EPORP19235 508 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 RPS9P46781 194 aaKnown RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 GLYATQ6IB77 296 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 MEIOBQ8N635 442 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 PCSK9Q8NBP7 692 aaKnown RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 LPGAT1Q92604 370 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 C2P06681 752 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 CKBP12277 381 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 SLC6A2P23975 617 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 LSM12Q3MHD2 195 aaKnown RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 SP140LQ9H930 580 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 PEX16Q9Y5Y5 336 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 S100A6P06703 90 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 MPSTP25325 297 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 HSF2Q03933 536 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 SCN1BQ07699 218 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 HIST3H2AQ7L7L0 130 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 PIGWQ7Z7B1 504 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 CMC1Q7Z7K0 106 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 HIST1H2ACQ93077 130 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 NKD2Q969F2 451 aaPredicted RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 C2orf49Q9BVC5 232 aaPredicted RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 WDR55Q9H6Y2 383 aaPredicted RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 MDM4O15151 490 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 TEX28O15482 410 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 SH3BGRLO75368 114 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 ZNF286BP0CG31 522 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 GOT1P17174 413 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 CES1P23141 567 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 BDNFP23560 247 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 IGFBP5P24593 272 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 MTHFRP42898 656 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 TUFMP49411 452 aaKnown RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 SKIV2LQ15477 1246 aaKnown RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 IL17AQ16552 155 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 C12orf50Q8NA57 414 aaPredicted RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 MINDY2Q8NBR6 621 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 CLPTM1LQ96KA5 538 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 SENP8Q96LD8 212 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 TMEM165Q9HC07 324 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 DNAJB4Q9UDY4 337 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 AP3D1O14617 1153 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 PCDH8O95206 1070 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 POMCP01189 267 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 ERCC2P18074 760 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 TSPAN8P19075 237 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 FCGRTP55899 365 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 HSPA14Q0VDF9 509 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 PTP4A2Q12974 167 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 CTBP1Q13363 440 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 SETMARQ53H47 684 aaPredicted RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 ZC3H12AQ5D1E8 599 aaKnown RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 CCNYL2Q5T2Q4 361 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 DSG4Q86SJ6 1040 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 OR52K2Q8NGK3 314 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 SUN5Q8TC36 379 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 ZYG11BQ9C0D3 744 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 PCDH12Q9NPG4 1184 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 PPP2R3BQ9Y5P8 575 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
RNF43-208ENST00000584437 PIAS1O75925 651 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 PGK1P00558 417 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 FGF1P05230 155 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 CTSKP43235 329 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 RPS6KA3P51812 740 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 RTP1P59025 263 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 P2RY8Q86VZ1 359 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 SPPL2CQ8IUH8 684 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 SLC34A3Q8N130 599 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 ELMO1Q92556 727 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 NFKBIZQ9BYH8 718 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 USP20Q9Y2K6 914 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 TELO2Q9Y4R8 837 aa13.07□□□□□ -0.32
RNF43-208ENST00000584437 CCDC189A1A4V9 331 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 PRMT5O14744 637 aaPredicted RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 NDUFB5O43674 189 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 TULP3O75386 442 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 CYP4B1P13584 511 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 PCSK2P16519 638 aa13.06□□□□□ -0.32
RNF43-208ENST00000584437 PSMA1P25786 263 aaKnown RBP13.06□□□□□ -0.32
RNF43-208ENST00000584437 ZNHIT3Q15649 155 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms