RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CPNE8Q86YQ8 564 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 CCDC117Q8IWD4 279 aaPredicted RBP11.59□□□□□ -0.55
NUP85-224ENST00000583948 SH2D3CQ8N5H7 860 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 MYRIPQ8NFW9 859 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 COG1Q8WTW3 980 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 TSACCQ96A04 125 aaPredicted RBP11.59□□□□□ -0.55
NUP85-224ENST00000583948 IFT43Q96FT9 208 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 STRADBQ9C0K7 418 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 RDH14Q9HBH5 336 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 TP53TG5Q9Y2B4 290 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 PCDHB11Q9Y5F2 797 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 SNX10Q9Y5X0 201 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 HS3ST3A1Q9Y663 406 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 ALG6Q9Y672 507 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 NF1P21359 2839 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 SYNJ2BP-COX16A0A087WUM0 186 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 UQCRHLA0A096LP55 91 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 TCRBV5S1A1TA0A578 114 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 TYW5A2RUC4 315 aaKnown RBP11.58□□□□□ -0.56
NUP85-224ENST00000583948 PRR19A6NJB7 356 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 TPP1O14773 563 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 PROSCO94903 275 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 PRKCGP05129 697 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 UQCRHP07919 91 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 KRT3P12035 628 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 GJC1P36383 396 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 GABRB2P47870 512 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 RNASE9P60153 205 aaKnown RBP11.58□□□□□ -0.56
NUP85-224ENST00000583948 RPL7AP62424 266 aaKnown RBP11.58□□□□□ -0.56
NUP85-224ENST00000583948 DEFB109BQ30KR1 87 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 ERN2Q76MJ5 926 aaKnown RBP11.58□□□□□ -0.56
NUP85-224ENST00000583948 RD3Q7Z3Z2 195 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 UBL4BQ8N7F7 174 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 CEP112Q8N8E3 955 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 LRRN4CLQ8ND94 238 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 JOSD2Q8TAC2 188 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 SLC35F5Q8WV83 523 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 HES6Q96HZ4 224 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 FEM1AQ9BSK4 669 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 MBNL1Q9NR56 388 aaKnown RBP11.58□□□□□ -0.56
NUP85-224ENST00000583948 COX16Q9P0S2 106 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 SPASTQ9UBP0 616 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 IP6K2Q9UHH9 426 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 OR51B4Q9Y5P0 310 aa11.58□□□□□ -0.56
NUP85-224ENST00000583948 RP1L1Q8IWN7 2480 aaPredicted RBP11.58□□□□□ -0.56
NUP85-224ENST00000583948 TMEM191CA6NGB0 347 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 SIGLEC16A6NMB1 481 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 MIF4GDA9UHW6 222 aaKnown RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 LMO7DNF2Z398 122 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 DDX3YO15523 660 aaKnown RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 CEP104O60308 925 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 LEFTY1O75610 366 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 MPSTP25325 297 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 PSMA2P25787 234 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 OAS2P29728 719 aaKnown RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 CCKBRP32239 447 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 IGFALSP35858 605 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 ABL2P42684 1182 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 PAFAH1B1P43034 410 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 ACADSBP45954 432 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 CD97P48960 835 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 RPIAP49247 311 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 GSCP56915 257 aaPredicted RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 PFN3P60673 137 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 ZFP36L1Q07352 338 aaKnown RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 PPP1R15BQ5SWA1 713 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 CAPRIN2Q6IMN6 1127 aaKnown RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 ESRP1Q6NXG1 681 aaKnown RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 EMC1Q8N766 993 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 ATP11CQ8NB49 1132 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 SSC4DQ8WTU2 575 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 STK32AQ8WU08 396 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 NAT6Q93015 286 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 AZIN2Q96A70 460 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 MS4A14Q96JA4 679 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 PBKQ96KB5 322 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 PRMT1Q99873 361 aaKnown RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 SMARCAL1Q9NZC9 954 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.57□□□□□ -0.56
NUP85-224ENST00000583948 LCMT1Q9UIC8 334 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 SLC25A13Q9UJS0 675 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 VPS28Q9UK41 221 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 GPR34Q9UPC5 381 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 FADS3Q9Y5Q0 445 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 V9GYY5 206 aaPredicted RBP11.57□□□□□ -0.56
NUP85-224ENST00000583948 CSMD2Q7Z408 3487 aa11.57□□□□□ -0.56
NUP85-224ENST00000583948 AKAP9Q99996 3911 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 CTAGE15A4D2H0 777 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 FPGTO14772 594 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 GRAP2O75791 330 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 CNTN5O94779 1100 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 CTAGE8P0CG41 777 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 FGF3P11487 239 aaPredicted RBP11.56□□□□□ -0.56
NUP85-224ENST00000583948 CTNNA2P26232 953 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 MAN1A1P33908 653 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
NUP85-224ENST00000583948 SLC1A1P43005 524 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 RABIFP47224 123 aa11.56□□□□□ -0.56
NUP85-224ENST00000583948 MARCKSL1P49006 195 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms