RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 FRG1Q14331 258 aaKnown RBP18.19■□□□□ 0.5
NDEL1-217ENST00000583683 PTPRCAPQ14761 206 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 STAT4Q14765 748 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 KBTBD12Q3ZCT8 623 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 LRIG3Q6UXM1 1119 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 USP45Q70EL2 814 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 PARS2Q7L3T8 475 aaKnown RBP18.19■□□□□ 0.5
NDEL1-217ENST00000583683 LYSMD3Q7Z3D4 306 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 NDUFAF2Q8N183 169 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 TTC30BQ8N4P2 665 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 PEX13Q92968 403 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 CERS2Q96G23 380 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 SRPK1Q96SB4 655 aaKnown RBP18.19■□□□□ 0.5
NDEL1-217ENST00000583683 CD248Q9HCU0 757 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 FBXL21Q9UKT6 434 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 C2orf81A6NN90 581 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 UPK3BL1B0FP48 263 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 UPK3BL2E5RIL1 263 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 C1QTNF3-AMACRE9PGA6 284 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 ARNTP27540 789 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 ZNF140P52738 457 aaPredicted RBP18.19■□□□□ 0.5
NDEL1-217ENST00000583683 COPAP53621 1224 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 STARD6P59095 220 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 SATB1Q01826 763 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 SEMG2Q02383 582 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 ACVR1Q04771 509 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 ZNF844Q08AG5 666 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 IFFO1Q0D2I5 559 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 STARD3Q14849 445 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 EFTUD2Q15029 972 aaKnown RBP eCLIP18.19■□□□□ 0.5
NDEL1-217ENST00000583683 HSF5Q4G112 596 aaPredicted RBP18.19■□□□□ 0.5
NDEL1-217ENST00000583683 TTC7BQ86TV6 843 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 UBALD2Q8IYN6 164 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 OR13C4Q8NGS5 318 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 STYXQ8WUJ0 223 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 ARRDC3Q96B67 414 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 CD320Q9NPF0 282 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 SMYD2Q9NRG4 433 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 RIMKLBQ9ULI2 386 aa18.19■□□□□ 0.5
NDEL1-217ENST00000583683 C1orf232A0A0U1RR37 186 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 EXOC1LA0A1B0GW35 172 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 A8MX80 341 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 SLC4A1P02730 911 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 COL9A1P20849 921 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 LPOP22079 712 aaPredicted RBP18.18■□□□□ 0.5
NDEL1-217ENST00000583683 TARSP26639 723 aaKnown RBP18.18■□□□□ 0.5
NDEL1-217ENST00000583683 HMGCLP35914 325 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 ARCN1P48444 511 aaKnown RBP18.18■□□□□ 0.5
NDEL1-217ENST00000583683 PSMD8P48556 350 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 TSPAN33Q86UF1 283 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 OR2T3Q8NH03 318 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 PPP1R16AQ96I34 528 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 SHDQ96IW2 340 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 DNAJC1Q96KC8 554 aaKnown RBP18.18■□□□□ 0.5
NDEL1-217ENST00000583683 CYTH2Q99418 400 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 GPR63Q9BZJ6 419 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 MKRN2Q9H000 416 aaKnown RBP18.18■□□□□ 0.5
NDEL1-217ENST00000583683 ZFYVE1Q9HBF4 777 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 PCDH12Q9NPG4 1184 aa18.18■□□□□ 0.5
NDEL1-217ENST00000583683 MTF2Q9Y483 593 aaPredicted RBP18.18■□□□□ 0.5
NDEL1-217ENST00000583683 FAM159BA6NKW6 160 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 CXorf49A8MYA2 514 aaPredicted RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 VAPBO95292 243 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 CLDN7O95471 211 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 ERVK-10P10266 1014 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 PAMP19021 973 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 LHCGRP22888 699 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 PSMA3P25788 255 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 ARSDP51689 593 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 PDE1BQ01064 536 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 SMAD1Q15797 465 aaKnown RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 LONRF1Q17RB8 773 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 SKIDA1Q1XH10 827 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 FAM46CQ5VWP2 391 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 KIAA0930Q6ICG6 404 aaPredicted RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 CRTC1Q6UUV9 634 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 Q6ZS52 159 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 GJD3Q8N144 294 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 SIX5Q8N196 739 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 OR4K2Q8NGD2 314 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 EPS8L3Q8TE67 593 aaKnown RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 CCDC77Q9BR77 488 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 TMEM109Q9BVC6 243 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 PPANQ9NQ55 473 aaKnown RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 NLE1Q9NVX2 485 aaPredicted RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 POLR3BQ9NW08 1133 aaPredicted RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 B4GALT6Q9UBX8 382 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 MUTYHQ9UIF7 546 aa18.17■□□□□ 0.5
NDEL1-217ENST00000583683 MRPS17Q9Y2R5 130 aaKnown RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 ZNF106Q9H2Y7 1883 aaKnown RBP18.17■□□□□ 0.5
NDEL1-217ENST00000583683 KANSL1LA0AUZ9 987 aa18.16■□□□□ 0.5
NDEL1-217ENST00000583683 CCL22O00626 93 aa18.16■□□□□ 0.5
NDEL1-217ENST00000583683 RNASEH1O60930 286 aaKnown RBP18.16■□□□□ 0.5
NDEL1-217ENST00000583683 TCEA3O75764 348 aa18.16■□□□□ 0.5
NDEL1-217ENST00000583683 GCAP28676 217 aa18.16■□□□□ 0.5
NDEL1-217ENST00000583683 TMPRSS15P98073 1019 aa18.16■□□□□ 0.5
NDEL1-217ENST00000583683 FZD5Q13467 585 aa18.16■□□□□ 0.5
NDEL1-217ENST00000583683 CST6Q15828 149 aa18.16■□□□□ 0.5
NDEL1-217ENST00000583683 KLHL38Q2WGJ6 581 aa18.16■□□□□ 0.5
NDEL1-217ENST00000583683 EOGTQ5NDL2 527 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms