RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TMPRSS12Q86WS5 348 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 CNTD1Q8N815 330 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 SEMA3CQ99985 751 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 HAUS2Q9NVX0 235 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 GGT7Q9UJ14 662 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 PCDHGC4Q9Y5F7 938 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 PRAMEF26H0Y7S4 382 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 RFPL3O75679 317 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 HLA-DQB2P05538 268 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 ITIH2P19823 946 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 ZBTB17Q13105 803 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 COL28A1Q2UY09 1125 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 SEL1L3Q68CR1 1132 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 PDCD7Q8N8D1 485 aaKnown RBP25■■□□□ 1.59
TSEN54-209ENST00000583454 ARRDC2Q8TBH0 407 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 ITM2BQ9Y287 266 aa25■■□□□ 1.59
TSEN54-209ENST00000583454 A0A1W2PQ67 120 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 PTMAP06454 111 aaKnown RBP24.99■■□□□ 1.59
TSEN54-209ENST00000583454 C1SP09871 688 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 PRLRP16471 622 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 POLR2LP62875 67 aaKnown RBP24.99■■□□□ 1.59
TSEN54-209ENST00000583454 ITKQ08881 620 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 TRAF2Q12933 501 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 XRCC4Q13426 336 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 IHHQ14623 411 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 TMEM52BQ4KMG9 183 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 LRRC73Q5JTD7 316 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 CFAP58Q5T655 872 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 MEI1Q5TIA1 1274 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 TFB1MQ8WVM0 346 aaKnown RBP24.99■■□□□ 1.59
TSEN54-209ENST00000583454 C1QTNF2Q9BXJ5 285 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 CAAP1Q9H8G2 361 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 PCDH12Q9NPG4 1184 aa24.99■■□□□ 1.59
TSEN54-209ENST00000583454 NEMP1O14524 444 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 RIOK3O14730 519 aaKnown RBP24.98■■□□□ 1.59
TSEN54-209ENST00000583454 TJP3O95049 919 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 XPAP23025 273 aaPredicted RBP24.98■■□□□ 1.59
TSEN54-209ENST00000583454 NIPAL4Q0D2K0 466 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 ELP6Q0PNE2 266 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 ZNF211Q13398 564 aaPredicted RBP24.98■■□□□ 1.59
TSEN54-209ENST00000583454 STAT4Q14765 748 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 B4GALNT4Q76KP1 1039 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 ASB12Q8WXK4 309 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 KLK6Q92876 244 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 HAUS1Q96CS2 278 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 ALS2CR12Q96Q35 445 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 SLC17A9Q9BYT1 436 aa24.98■■□□□ 1.59
TSEN54-209ENST00000583454 KALRNO60229 2985 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 LRRK1Q38SD2 2015 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 IGLON5A6NGN9 336 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 HACD1B0YJ81 288 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 SLC31A1O15431 190 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 MAGEC1O60732 1142 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 NEBLO76041 1014 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 DSC2Q02487 901 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 FGL2Q14314 439 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 NOMO1Q15155 1222 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 PROX2Q3B8N5 592 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 TEX44Q53QW1 395 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 CCDC181Q5TID7 509 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 PDZD3Q86UT5 571 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 ZC3H18Q86VM9 953 aaKnown RBP24.97■■□□□ 1.59
TSEN54-209ENST00000583454 TRIM58Q8NG06 486 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 ACTL9Q8TC94 416 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 QKIQ96PU8 341 aaKnown RBP eCLIP24.97■■□□□ 1.59
TSEN54-209ENST00000583454 MYOCQ99972 504 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 RAI2Q9Y5P3 530 aa24.97■■□□□ 1.59
TSEN54-209ENST00000583454 GCN1Q92616 2671 aaKnown RBP24.96■■□□□ 1.59
TSEN54-209ENST00000583454 MTSS1O43312 755 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 SDC3O75056 442 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 PGLSO95336 258 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 MMP12P39900 470 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 OTUD4Q01804 1114 aaKnown RBP24.96■■□□□ 1.59
TSEN54-209ENST00000583454 WASHC5Q12768 1159 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 ERAP2Q6P179 960 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 SLC25A45Q8N413 288 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 HNRNPLLQ8WVV9 542 aaKnown RBP24.96■■□□□ 1.59
TSEN54-209ENST00000583454 KLHDC7BQ96G42 594 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 FZD3Q9NPG1 666 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 SEPT10Q9P0V9 454 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 TTLL3Q9Y4R7 772 aa24.96■■□□□ 1.59
TSEN54-209ENST00000583454 TRIM38O00635 465 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 FZD6O60353 706 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 PAK4O96013 591 aaPredicted RBP24.95■■□□□ 1.58
TSEN54-209ENST00000583454 MMP2P08253 660 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 THEGLP0DJG4 465 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 CDK4P11802 303 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 PTPN3P26045 913 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 KLF1Q13351 362 aaPredicted RBP24.95■■□□□ 1.58
TSEN54-209ENST00000583454 RPS6KA1Q15418 735 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 ARMC12Q5T9G4 340 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 GCNT7Q6ZNI0 430 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 REXO1L1PQ8IX06 675 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 TEKT5Q96M29 485 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 AGAP3Q96P47 875 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 CEP41Q9BYV8 373 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 PHTF1Q9UMS5 762 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 PPIL1Q9Y3C6 166 aa24.95■■□□□ 1.58
TSEN54-209ENST00000583454 ASXL3Q9C0F0 2248 aa24.94■■□□□ 1.58
TSEN54-209ENST00000583454 PTPRQQ9UMZ3 2332 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms