RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 NLE1Q9NVX2 485 aaPredicted RBP6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 OXSMQ9NWU1 459 aa6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 DNAJC28Q9NX36 388 aa6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 CPSF2Q9P2I0 782 aaKnown RBP6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 DNMT3BQ9UBC3 853 aaKnown RBP6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 LNPEPQ9UIQ6 1025 aa6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 VPS9D1Q9Y2B5 631 aa6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 FCF1Q9Y324 198 aaKnown RBP6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 SLC4A7Q9Y6M7 1214 aa6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 ANKRD36A6QL64 1941 aa6.33□□□□□ -1.4
PPP4R1-217ENST00000580583 CXorf51AA0A1B0GTR3 108 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 LINC01553A4QN01 128 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SOBPA7XYQ1 873 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 HIDE1A8MVS5 230 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 TARM1B6A8C7 271 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 NRG2O14511 850 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 TRAFD1O14545 582 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PFDN6O15212 129 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 BUD23O43709 281 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 NPHS1O60500 1241 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SOCS5O75159 536 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 XYLBO75191 536 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PGLSO95336 258 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 WISP3O95389 354 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 CBX6O95503 412 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 S1PR4O95977 384 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PRLP01236 227 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SERPINA6P08185 405 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 LTA4HP09960 611 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SBK3P0C264 359 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 GJA1P17302 382 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 LPOP22079 712 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ATP5F1P24539 256 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 MPSTP25325 297 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PMLP29590 882 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ARRB2P32121 409 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SUOXP51687 545 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 CLCN4P51793 760 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PGGT1BP53609 377 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 EPHB1P54762 984 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 CDKN2DP55273 166 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 RPL26P61254 145 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ELF3P78545 371 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ZXDBP98169 803 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PFKPQ01813 784 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 LMAN2Q12907 356 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 DLG1Q12959 904 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 USP4Q13107 963 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PRKAA1Q13131 559 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 CSHL1Q14406 222 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SEMA3AQ14563 771 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PTPRCAPQ14761 206 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PLEKHG6Q3KR16 790 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ZNF789Q5FWF6 425 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 AARS2Q5JTZ9 985 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ATXN7L2Q5T6C5 722 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 GPR158Q5T848 1215 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 NAPRTQ6XQN6 538 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 RTL10Q7L3V2 364 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PIWIL4Q7Z3Z4 852 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 MAVSQ7Z434 540 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 TTC7BQ86TV6 843 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 LDB1Q86U70 411 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PIM3Q86V86 326 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 C7orf61Q8IZ16 206 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 FSTL5Q8N475 847 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 TTC30BQ8N4P2 665 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 MRPL43Q8N983 215 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ZNF557Q8N988 423 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 OR4K2Q8NGD2 314 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 OR4L1Q8NH43 312 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SH3RF2Q8TEC5 729 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PDCD6IPQ8WUM4 868 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 HEXDCQ8WVB3 486 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 POF1BQ8WVV4 589 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 STON2Q8WXE9 905 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 LPGAT1Q92604 370 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 BHMTQ93088 406 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 NXNL1Q96CM4 212 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 CCDC126Q96EE4 140 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PTCD3Q96EY7 689 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ALG14Q96F25 216 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 PRR11Q96HE9 360 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 NSMCE3Q96MG7 304 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 RILPQ96NA2 401 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 TMEM237Q96Q45 408 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 EBF4Q9BQW3 602 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 GATA5Q9BWX5 397 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 TM6SF2Q9BZW4 377 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 C20orf27Q9GZN8 174 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 NMUR2Q9GZQ4 415 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 DRC3Q9H069 523 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SMG9Q9H0W8 520 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 CDH19Q9H159 772 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 SUDS3Q9H7L9 328 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 MAN1C1Q9NR34 630 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 ARHGEF3Q9NR81 526 aa6.32□□□□□ -1.4
PPP4R1-217ENST00000580583 HCFC1R1Q9NWW0 138 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms