RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 WDR26Q9H7D7 661 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CYP4F12Q9HCS2 524 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ZNF71Q9NQZ8 489 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 KCTD5Q9NXV2 234 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ATP8A1Q9Y2Q0 1164 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 B3GALT1Q9Y5Z6 326 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ANKRD36A6QL64 1941 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PRSS38A1L453 326 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 BLACEA4D250 179 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ENO4A6NNW6 628 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 GOLGA8SH3BPF8 625 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RAD1O60671 282 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RECQL5O94762 991 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PLEKP08567 350 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CCNB1P14635 433 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MAP4P27816 1152 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CD1CP29017 333 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SDC4P31431 198 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NOP2P46087 812 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CD97P48960 835 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 OR1D5P58170 312 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 POLR2LP62875 67 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RAPGEF1Q13905 1077 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PARP15Q460N3 678 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CRTC2Q53ET0 693 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 STRADAQ7RTN6 431 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ZDHHC1Q8WTX9 485 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MIB2Q96AX9 1013 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CCDC74BQ96LY2 380 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NUDT22Q9BRQ3 303 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ZPBPQ9BS86 351 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TRIT1Q9H3H1 467 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 GPN2Q9H9Y4 310 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MRPL40Q9NQ50 206 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TRNAU1APQ9NX07 287 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SLC39A1Q9NY26 324 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 DONSONQ9NYP3 566 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MOSPD1Q9UJG1 213 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 DNAJC12Q9UKB3 198 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CACNA1DQ01668 2161 aa12.25□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PIGNO95427 931 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ELFN1P0C7U0 828 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 BMP6P22004 513 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SERPINA4P29622 427 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ARSDP51689 593 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 GPLD1P80108 840 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ESPL1Q14674 2120 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CDO1Q16878 200 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 HIVEP3Q5T1R4 2406 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 KCTD16Q68DU8 428 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CREBRFQ8IUR6 639 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NLGN4XQ8N0W4 816 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RTL3Q8N8U3 475 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PLA2G15Q8NCC3 412 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NLGN4YQ8NFZ3 816 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ABHD17AQ96GS6 310 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ATP13A3Q9H7F0 1226 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CARS2Q9HA77 564 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SPATS2LQ9NUQ6 558 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PILRAQ9UKJ1 303 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NEU3Q9UQ49 428 aa12.24□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RASA4BC9J798 803 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FAM72CH0Y354 149 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 INSIG1O15503 277 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NKX2-8O15522 239 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RASA4O43374 803 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FGF1P05230 155 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 THRAP10827 490 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MYCLP1P12525 358 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CYP11B1P15538 503 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PTPN9P43378 593 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CSNK1DP48730 415 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 COPB1P53618 953 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MAZP56270 477 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 APBA1Q02410 837 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ABHD18Q0P651 414 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CDC20Q12834 499 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FAM72AQ5TYM5 149 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FAM72DQ6L9T8 149 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TRNP1Q6NT89 227 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PNCKQ6P2M8 343 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TMEM71Q6P5X7 295 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CEACAM20Q6UY09 585 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LIPIQ6XZB0 460 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FAM72BQ86X60 149 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FAM129CQ86XR2 697 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SFTPA2Q8IWL1 248 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NRSN1Q8IZ57 195 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PAF1Q8N7H5 531 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NTAN1Q96AB6 310 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CATSPERBQ9H7T0 1116 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 METTL5Q9NRN9 209 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PHPT1Q9NRX4 125 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TAAR2Q9P1P5 351 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LHX3Q9UBR4 397 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 UBA2Q9UBT2 640 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PLAAQ9Y263 795 aa12.23□□□□□ -0.45
CDK5RAP3-216ENST00000579853 KCTD3Q9Y597 815 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 2297.2 ms