RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 POLNQ7Z5Q5 900 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PAF1Q8N7H5 531 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SLC39A7Q92504 469 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SLC46A1Q96NT5 459 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CSPG4P5Q96PW8 444 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ETNK2Q9NVF9 386 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 B4GALT6Q9UBX8 382 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 COL6A6A6NMZ7 2263 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SCN8AQ9UQD0 1980 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TTC24A2A3L6 582 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CDRT15L2A8MXV6 281 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TK2O00142 265 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HTRA2O43464 458 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SOCS5O75159 536 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 C1QL1O75973 258 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PRB1P04280 392 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 AMPD1P23109 780 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 RBMS1P29558 406 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TRIM23P36406 574 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HSPA9P38646 679 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 UCNP55089 124 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TMPRSS3P57727 454 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 BOLA3Q53S33 107 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 BROXQ5VW32 411 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HGSNATQ68CP4 663 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 B3GNT8Q7Z7M8 397 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PELI3Q8N2H9 469 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PGBD5Q8N414 524 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 OR56A4Q8NGH8 313 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 WDR36Q8NI36 951 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HSPH1Q92598 858 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 MGME1Q9BQP7 344 aa16.69■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CCDC187A0A096LP49 1063 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 A8MX80 341 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 D6RAR5 112 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TNFRSF10CO14798 259 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 KLK10O43240 276 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 MAFKO60675 156 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SERPINC1P01008 464 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TNFP01375 233 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HOXC4P09017 264 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 RARAP10276 462 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 KELP23276 732 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 MLLT3P42568 568 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TDRD12Q587J7 1177 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TXNRD3NBQ6F5E7 133 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CLEC14AQ86T13 490 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 NIPA2Q8N8Q9 360 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 LSM14AQ8ND56 463 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 GPR156Q8NFN8 814 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TEKT4Q8WW24 435 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 LIN37Q96GY3 246 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 COQ10AQ96MF6 247 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 NUDCD1Q96RS6 583 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 LGR4Q9BXB1 951 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 DPH1Q9BZG8 443 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 WDR26Q9H7D7 661 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CPNE5Q9HCH3 593 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 MRPL40Q9NQ50 206 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SSUH2Q9Y2M2 353 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PCDHGC4Q9Y5F7 938 aa16.68■□□□□ 0.26
CDK5RAP3-206ENST00000578018 A0A1W2PQ67 120 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 A0A1W2PQJ5 194 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 A0A1W2PQM1 296 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CPP00450 1065 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 RPLP0P05388 317 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PBX1P40424 430 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CCL7P80098 99 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SLC25A11Q02978 314 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TRAF2Q12933 501 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PIGHQ14442 188 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ACOX1Q15067 660 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CNGA3Q16281 694 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PNCKQ6P2M8 343 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 FOXR1Q6PIV2 292 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PCSK4Q6UW60 755 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ARL14Q8N4G2 192 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ATPAF2Q8N5M1 289 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 OR6C4Q8NGE1 309 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 NUS1Q96E22 293 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 GFM1Q96RP9 751 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TMEM168Q9H0V1 697 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 THAP2Q9H0W7 228 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 NOD2Q9HC29 1040 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PCDH18Q9HCL0 1135 aa16.67■□□□□ 0.26
CDK5RAP3-206ENST00000578018 NOBOXO60393 691 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HEXIM1O94992 359 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TNFSF15O95150 251 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ITGA2BP08514 1039 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 MYCLP1P12525 358 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 LHCGRP22888 699 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 VIPR1P32241 457 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SERPINB6P35237 376 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 MAXP61244 160 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CERCAMQ5T4B2 595 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 OGFOD3Q6PK18 319 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TAF8Q7Z7C8 310 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CCNJLQ8IV13 435 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms