RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 MYBPHLA2RUH7 354 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 GMNCA6NCL1 334 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 HHLA1C9JL84 531 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 H7C0C1 242 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ARVCFO00192 962 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 AQP7O14520 342 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 TRDMT1O14717 391 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 NCAM2O15394 837 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 MTSS1O43312 755 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 GRAP2O75791 330 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 B3GAT3O94766 335 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 OAZ2O95190 189 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 PARNO95453 639 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 FAM107AO95990 144 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ZBED1O96006 694 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 IFNB1P01574 187 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 FYNP06241 537 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ZSCAN5DPP0CG00 497 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 GHRP10912 638 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 CKBP12277 381 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ATP2A2P16615 1042 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 FBLP22087 321 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 CYP2F1P24903 491 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 FDFT1P37268 417 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 MAGEA11P43364 429 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ATP5OP48047 213 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 CXCR3P49682 368 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 VPS41P49754 854 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 CLCNKBP51801 687 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 TKTL1P51854 596 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 HNRNPH2P55795 449 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 DYNLT1P63172 113 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 TSPY1Q01534 308 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ZNF33AQ06730 810 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 DSC1Q08554 894 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ADIGQ0VDE8 80 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 SEMA3BQ13214 749 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 PAFAH1B3Q15102 231 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 CRY1Q16526 586 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 CA9Q16790 459 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 DDR2Q16832 855 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 CDO1Q16878 200 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 CCDC38Q502W7 563 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 DNAJC21Q5F1R6 531 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 MDH1BQ5I0G3 518 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 NOMO2Q5JPE7 1267 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 C4orf50Q6ZRC1 276 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 C16orf59Q7L2K0 433 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 MRGPREQ86SM8 312 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 RTN4RL1Q86UN2 441 aaPredicted RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 EXOC3L1Q86VI1 746 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 UNC45BQ8IWX7 931 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 FAM71DQ8N9W8 422 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ATP11CQ8NB49 1132 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 GLIS1Q8NBF1 620 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ZMIZ2Q8NF64 920 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 URGCPQ8TCY9 931 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 RAET1EQ8TD07 263 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 BCAS4Q8TDM0 211 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 SLC25A43Q8WUT9 341 aaPredicted RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 APBB2Q92870 758 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 LPPQ93052 612 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 PCED1BQ96HM7 432 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 FUBP3Q96I24 572 aaKnown RBP eCLIP4.97□□□□□ -1.61
IFT20-205ENST00000578009 QKIQ96PU8 341 aaKnown RBP eCLIP4.97□□□□□ -1.61
IFT20-205ENST00000578009 CSPG4P5Q96PW8 444 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 XPO6Q96QU8 1125 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 CCT8L2Q96SF2 557 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 SMOQ99835 787 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 FAM118BQ9BPY3 351 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 RTP3Q9BQQ7 232 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 MED10Q9BTT4 135 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 GPR87Q9BY21 358 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.97□□□□□ -1.61
IFT20-205ENST00000578009 CENPHQ9H3R5 247 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 DHX35Q9H5Z1 703 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 XAB2Q9HCS7 855 aaKnown RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 SAYSD1Q9NPB0 183 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 DMAP1Q9NPF5 467 aaPredicted RBP4.97□□□□□ -1.61
IFT20-205ENST00000578009 TMEM161AQ9NX61 479 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 SAGE1Q9NXZ1 904 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 BCCIPQ9P287 314 aaKnown RBP eCLIP4.97□□□□□ -1.61
IFT20-205ENST00000578009 PTGFRNQ9P2B2 879 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 ZNHIT2Q9UHR6 403 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 NAALADL1Q9UQQ1 740 aa4.97□□□□□ -1.61
IFT20-205ENST00000578009 MGAMO43451 1857 aa4.96□□□□□ -1.61
IFT20-205ENST00000578009 PDCD11Q14690 1871 aaKnown RBP4.96□□□□□ -1.61
IFT20-205ENST00000578009 CASTOR2A6NHX0 329 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 M0QYT0 321 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 CLDN5O00501 218 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 EBAG9O00559 213 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 NDUFAB1O14561 156 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 NRP1O14786 923 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 CAPN9O14815 690 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 WNT9AO14904 365 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 PPP1R12AO14974 1030 aaPredicted RBP4.96□□□□□ -1.62
IFT20-205ENST00000578009 SYN3O14994 580 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 HCRTO43612 131 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 OPHN1O60890 802 aa4.96□□□□□ -1.62
IFT20-205ENST00000578009 BEST1O76090 585 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms