RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 ELP6Q0PNE2 266 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 SFSWAPQ12872 951 aaKnown RBP9.81□□□□□ -0.84
NDE1-212ENST00000577101 AGERQ15109 404 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 SHBQ15464 509 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 CSRP2Q16527 193 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 WSCD2Q2TBF2 565 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 TRIM61Q5EBN2 209 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 SIRPB2Q5JXA9 342 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 SYCP2LQ5T4T6 812 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 LRRC66Q68CR7 880 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 RANBP10Q6VN20 620 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 PRR23CQ6ZRP0 262 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 ASB12Q8WXK4 309 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 FAM122AQ96E09 287 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 LENG8Q96PV6 779 aaPredicted RBP9.81□□□□□ -0.84
NDE1-212ENST00000577101 AGAP2Q99490 1192 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 APOL2Q9BQE5 337 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 FRMD8P1Q9BZ68 369 aaPredicted RBP9.81□□□□□ -0.84
NDE1-212ENST00000577101 IL21RQ9HBE5 538 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 ETNK1Q9HBU6 452 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 NCDNQ9UBB6 729 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 FAM153AQ9UHL3 310 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 GMEB2Q9UKD1 530 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 RAB23Q9ULC3 237 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 CACNA1EQ15878 2313 aa9.81□□□□□ -0.84
NDE1-212ENST00000577101 BPTFQ12830 3046 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 A0A1B0GTW7 788 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 A0A1W2PQ67 120 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 TCRBV7S3A2A0A539 114 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 K7ESM1 405 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 PGRMC1O00264 195 aaKnown RBP9.8□□□□□ -0.84
NDE1-212ENST00000577101 OPHN1O60890 802 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 TM7SF2O76062 418 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 RECQL5O94762 991 aaPredicted RBP9.8□□□□□ -0.84
NDE1-212ENST00000577101 NDST3O95803 873 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 TCP1P17987 556 aaKnown RBP9.8□□□□□ -0.84
NDE1-212ENST00000577101 HNRNPA2B1P22626 353 aaKnown RBP9.8□□□□□ -0.84
NDE1-212ENST00000577101 COILP38432 576 aaPredicted RBP9.8□□□□□ -0.84
NDE1-212ENST00000577101 PTGIRP43119 386 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 GRIA4P48058 902 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 SUOXP51687 545 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 STC1P52823 247 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 PFN3P60673 137 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 RACK1P63244 317 aaKnown RBP9.8□□□□□ -0.84
NDE1-212ENST00000577101 GRIK2Q13002 908 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 MPP3Q13368 585 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 PTPRCAPQ14761 206 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 IRF4Q15306 451 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 SLC1A5Q15758 541 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 DUOXA1Q1HG43 343 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 P3H1Q32P28 736 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 HS1BP3Q53T59 392 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 WDR45BQ5MNZ6 344 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 NAPEPLDQ6IQ20 393 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 ZNF534Q76KX8 674 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 LYSMD3Q7Z3D4 306 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 ABI3BPQ7Z7G0 1075 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 TTC30BQ8N4P2 665 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 IPMKQ8NFU5 416 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 OR13H1Q8NG92 308 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 CXorf40AQ8TE69 158 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 SERAC1Q96JX3 654 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 CAPZA3Q96KX2 299 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 C16orf45Q96MC5 204 aaPredicted RBP9.8□□□□□ -0.84
NDE1-212ENST00000577101 FICDQ9BVA6 458 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 VPS45Q9NRW7 570 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 ZNF148Q9UQR1 794 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 SNX11Q9Y5W9 270 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 SAR1BQ9Y6B6 198 aa9.8□□□□□ -0.84
NDE1-212ENST00000577101 CTAGE9A4FU28 777 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 CFAP69A5D8W1 941 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 PRAMEF26H0Y7S4 382 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 VILLO15195 856 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 LRP3O75074 770 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 PHF2O75151 1096 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 NEBLO76041 1014 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 IFNB1P01574 187 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 ELFN1P0C7U0 828 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 ENGP17813 658 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 CD38P28907 300 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 STIP1P31948 543 aaKnown RBP9.79□□□□□ -0.84
NDE1-212ENST00000577101 HOXD12P35452 270 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 ETV3P41162 512 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 CTSKP43235 329 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 GEMP55040 296 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 RPL26P61254 145 aaKnown RBP9.79□□□□□ -0.84
NDE1-212ENST00000577101 POLR2LP62875 67 aaKnown RBP9.79□□□□□ -0.84
NDE1-212ENST00000577101 TRIP13Q15645 432 aaPredicted RBP9.79□□□□□ -0.84
NDE1-212ENST00000577101 PARP6Q2NL67 630 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 KIF19Q2TAC6 998 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 SETMARQ53H47 684 aaPredicted RBP9.79□□□□□ -0.84
NDE1-212ENST00000577101 PRAMEF14Q5SWL7 426 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 CFAP58Q5T655 872 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 Q6ZVL8 140 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 TMC3Q7Z5M5 1100 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 KIAA2013Q8IYS2 634 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 SLC25A41Q8N5S1 370 aa9.79□□□□□ -0.84
NDE1-212ENST00000577101 PDCD7Q8N8D1 485 aaKnown RBP9.79□□□□□ -0.84
NDE1-212ENST00000577101 PTCD2Q8WV60 388 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms