RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CASC3O15234 703 aaKnown RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 TM7SF2O76062 418 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 RECQL5O94762 991 aaPredicted RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 APOC2P02655 101 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 FUCA1P04066 466 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 CSF2P04141 144 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 ATXN1LP0C7T5 689 aaKnown RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 PYGMP11217 842 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 SPINK2P20155 84 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 MX2P20592 715 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 TGM2P21980 687 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 DGKAP23743 735 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 VIPR1P32241 457 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 TRIM23P36406 574 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 RABIFP47224 123 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 ATXN3P54252 364 aaPredicted RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 C21orf59P57076 290 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 CCDC15Q0P6D6 951 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 QPCTQ16769 361 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 ZNF662Q6ZS27 426 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 PTAR1Q7Z6K3 402 aaPredicted RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 PARGQ86W56 976 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 RFX6Q8HWS3 928 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 ZNF548Q8NEK5 533 aaPredicted RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 CXorf40AQ8TE69 158 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 GATA6Q92908 595 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 HAUS1Q96CS2 278 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 DTD2Q96FN9 168 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 KLHDC7BQ96G42 594 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 PDXPQ96GD0 296 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 OXNAD1Q96HP4 312 aaPredicted RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 TEKT5Q96M29 485 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 LRRC61Q9BV99 259 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 CLPBQ9H078 707 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 KCNF1Q9H3M0 494 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 C10orf88Q9H8K7 445 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 FGF22Q9HCT0 170 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 SCUBE2Q9NQ36 999 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 RBM22Q9NW64 420 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMG6-216ENST00000575176 EFR3BQ9Y2G0 817 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 R3HDM2Q9Y2K5 976 aaKnown RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 PCYT1BQ9Y5K3 369 aaPredicted RBP8.7□□□□□ -1.02
SMG6-216ENST00000575176 MACROD2A1Z1Q3 448 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 TMEM202A6NGA9 273 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 PSMD11O00231 422 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 YKT6O15498 198 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 DFNA5O60443 496 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 GCATO75600 419 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 FTCDO95954 541 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 MT-CYBP00156 380 aaPredicted RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 JCHAINP01591 159 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 ELFN1P0C7U0 828 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 TNNT1P13805 278 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 CTPS1P17812 591 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 HNF1BP35680 557 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 ETV3P41162 512 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 CD86P42081 329 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 GRK6P43250 576 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 STC1P52823 247 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 KIAA1024LP59773 190 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 SIM1P81133 766 aaPredicted RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 PTSQ03393 145 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 DNAJC3Q13217 504 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 MSLNQ13421 630 aaPredicted RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 MTM1Q13496 603 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 PDE1CQ14123 709 aaPredicted RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 STAT4Q14765 748 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 NFATC4Q14934 902 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 PDK1Q15118 436 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 SIX1Q15475 284 aaPredicted RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 TRIP6Q15654 476 aaKnown RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 ALG11Q2TAA5 492 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 ZNF542PQ5EBM4 170 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 LRRC66Q68CR7 880 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 CRTC1Q6UUV9 634 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 ADAT2Q7Z6V5 191 aaKnown RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 LRRC8AQ8IWT6 810 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 ZNF567Q8N184 647 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 OXR1Q8N573 874 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 OR4C6Q8NH72 309 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 SPATA22Q8NHS9 363 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 FAM174AQ8TBP5 190 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 ACTL9Q8TC94 416 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 ADAMTS14Q8WXS8 1223 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 RBM41Q96IZ5 413 aaKnown RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 PDLIM2Q96JY6 352 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 CALR3Q96L12 384 aaKnown RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 TBATAQ96M53 351 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 AGAP2Q99490 1192 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 NFKBIL1Q9UBC1 381 aaPredicted RBP8.69□□□□□ -1.02
SMG6-216ENST00000575176 KLK13Q9UKR3 277 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 PHTF1Q9UMS5 762 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 CHKBQ9Y259 395 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 OR1A2Q9Y585 309 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 SPO11Q9Y5K1 396 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 IGSF10Q6WRI0 2623 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 ATMQ13315 3056 aa8.69□□□□□ -1.02
SMG6-216ENST00000575176 A0A1W2PQ67 120 aa8.68□□□□□ -1.02
SMG6-216ENST00000575176 CCDC66A2RUB6 948 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms