RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	VIPR1	P32241	457 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	STX2	P32856	288 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	HADHA	P40939	763 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	MAGEA9	P43362	315 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	PSMD8	P48556	350 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	DGKE	P52429	567 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	PTPN5	P54829	565 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	SIGLEC14	Q08ET2	396 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	SEPT6	Q14141	434 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	SLC29A2	Q14542	456 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	CRYM	Q14894	314 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	UAP1	Q16222	522 aa	Predicted RBP	11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	ALS2CL	Q60I27	953 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	CRTC1	Q6UUV9	634 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	TMEM92	Q6UXU6	159 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	DPPA4	Q7L190	304 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	PARS2	Q7L3T8	475 aa	Known RBP	11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	TMPRSS6	Q8IU80	811 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	IQCK	Q8N0W5	287 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	TTC30B	Q8N4P2	665 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	PJA1	Q8NG27	643 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	EDA	Q92838	391 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	FAM131C	Q96AQ9	280 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	CFAP36	Q96G28	342 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	PKNOX2	Q96KN3	472 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	CCDC77	Q9BR77	488 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	GPR63	Q9BZJ6	419 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	EPB41L4B	Q9H329	900 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	VIPAS39	Q9H9C1	493 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	VPS37B	Q9H9H4	285 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZFYVE1	Q9HBF4	777 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	MOCS1	Q9NZB8	636 aa		11.93	□□□□□ -0.5
PRPF8-212	ENST00000575116	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116		H0Y858	1186 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	STK25	O00506	426 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	AREL1	O15033	823 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	MID1	O15344	667 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	STX7	O15400	261 aa	Known RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	SLC7A4	O43246	635 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	AP1G1	O43747	822 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	ACSL3	O95573	720 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	DNTT	P04053	509 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	PRKCG	P05129	697 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	ALPI	P09923	528 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	PIRT	P0C851	137 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	NMBR	P28336	390 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	P2RY2	P41231	377 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	EIF3B	P55884	814 aa	Known RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	FAM193A	P78312	1265 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	ARHGEF7	Q14155	803 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	STAT4	Q14765	748 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	CASP8	Q14790	479 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	LONRF1	Q17RB8	773 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	TMEM52B	Q4KMG9	183 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZDHHC20	Q5W0Z9	365 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	LRIG3	Q6UXM1	1119 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	MAMSTR	Q6ZN01	415 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	USP30	Q70CQ3	517 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	LYSMD3	Q7Z3D4	306 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	KBTBD6	Q86V97	674 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	CNPY4	Q8N129	248 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	CBARP	Q8N350	705 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	SPEM1	Q8N4L4	309 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZNF669	Q96BR6	464 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	MFSD3	Q96ES6	412 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	SIPA1	Q96FS4	1042 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	SGSM3	Q96HU1	749 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	FCRL3	Q96P31	734 aa	Predicted RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	FOXQ1	Q9C009	403 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	MKRN2	Q9H000	416 aa	Known RBP	11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	CHRD	Q9H2X0	955 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	PPCS	Q9HAB8	311 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	PLAC1	Q9HBJ0	212 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	PCDH12	Q9NPG4	1184 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	RAD18	Q9NS91	495 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	IL17C	Q9P0M4	197 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	B4GALT6	Q9UBX8	382 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	FETUB	Q9UGM5	382 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	SIT1	Q9Y3P8	196 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	PKP3	Q9Y446	797 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	ARL5A	Q9Y689	179 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	F5	P12259	2224 aa		11.92	□□□□□ -0.5
PRPF8-212	ENST00000575116	C1orf232	A0A0U1RR37	186 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	TCRBV9S1A1T	A0A576	114 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	RGSL1	A5PLK6	1076 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116		H7C0S8	307 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	PSMD11	O00231	422 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	MAP2K7	O14733	419 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	AURKA	O14965	403 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	TCEA3	O75764	348 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	RPP40	O75818	363 aa	Known RBP	11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	CLDN7	O95471	211 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	DRD3	P35462	400 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	MMP12	P39900	470 aa		11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	ZNF140	P52738	457 aa	Predicted RBP	11.91	□□□□□ -0.5
PRPF8-212	ENST00000575116	METAP1	P53582	386 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms