RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 FERMT1Q9BQL6 677 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 KIFC3Q9BVG8 833 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 GLIS2Q9BZE0 524 aaPredicted RBP5.05□□□□□ -1.6
TSR1-203ENST00000575049 TRIM7Q9C029 511 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 ZNF768Q9H5H4 540 aaKnown RBP5.05□□□□□ -1.6
TSR1-203ENST00000575049 SLC2A4RGQ9NR83 387 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 CYP39A1Q9NYL5 469 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 GDE1Q9NZC3 331 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 OGFRQ9NZT2 677 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 ARMCX3Q9UH62 379 aaPredicted RBP5.05□□□□□ -1.6
TSR1-203ENST00000575049 LEF1Q9UJU2 399 aaPredicted RBP5.05□□□□□ -1.6
TSR1-203ENST00000575049 RIMKLBQ9ULI2 386 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 NDRG4Q9ULP0 352 aaKnown RBP5.05□□□□□ -1.6
TSR1-203ENST00000575049 LIPGQ9Y5X9 500 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 RAD54BQ9Y620 910 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 CDC42BPAQ5VT25 1732 aa5.05□□□□□ -1.6
TSR1-203ENST00000575049 MAGI1Q96QZ7 1491 aaPredicted RBP5.05□□□□□ -1.6
TSR1-203ENST00000575049 SCAF11Q99590 1463 aaKnown RBP5.05□□□□□ -1.6
TSR1-203ENST00000575049 A0A1W2PRG0 241 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 CLRN2A0PK11 232 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 SYCE3A1L190 88 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 A6NL46 340 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 UBXN8O00124 270 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 SNAP23O00161 211 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 AP3B1O00203 1094 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 CACNB4O00305 520 aaPredicted RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 NARSO43776 548 aaKnown RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 AVILO75366 819 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 RPS6KA4O75676 772 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 DDHD2O94830 711 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 ITGB1P05556 798 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 CSF1RP07333 972 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 PDHBP11177 359 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 HOXA13P31271 388 aaPredicted RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 MCM5P33992 734 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 CAMLGP49069 296 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 RAB28P51157 221 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 PNLIPRP2P54317 469 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 RIPK4P57078 832 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 STX1BP61266 288 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 FAM189BP81408 668 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 IKQ13123 557 aaPredicted RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 SEMA3BQ13214 749 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 TRA2AQ13595 282 aaKnown RBP eCLIP5.04□□□□□ -1.62e-40■■■□□ 17.4
TSR1-203ENST00000575049 RUNX2Q13950 521 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 MVPQ14764 893 aaKnown RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 RPS6KA1Q15418 735 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 PROSER3Q2NL68 480 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 PDCD4Q53EL6 469 aaKnown RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 HSP90AA5PQ58FG0 334 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 CERCAMQ5T4B2 595 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 C12orf60Q5U649 245 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 FAM171A1Q5VUB5 890 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 C16orf89Q6UX73 402 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 GLDNQ6ZMI3 551 aaPredicted RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 CAMKMTQ7Z624 323 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 AACSQ86V21 672 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 MMP21Q8N119 569 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 Q8NA96 180 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 ZNF483Q8TF39 744 aaPredicted RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 LRRC59Q96AG4 307 aaKnown RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 HDAC11Q96DB2 347 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 MMABQ96EY8 250 aaPredicted RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 PRR11Q96HE9 360 aaPredicted RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 FAR2Q96K12 515 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 INTS14Q96SY0 518 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 TXN2Q99757 166 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 SMOQ99835 787 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 PTDSS2Q9BVG9 487 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 UTP14AQ9BVJ6 771 aaKnown RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 TEX101Q9BY14 249 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 GPR88Q9GZN0 384 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 POLE3Q9NRF9 147 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 AATFQ9NY61 560 aaKnown RBP eCLIP5.04□□□□□ -1.61e-10■■■■■ 54
TSR1-203ENST00000575049 NCKIPSDQ9NZQ3 722 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 SEPT10Q9P0V9 454 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 HDAC6Q9UBN7 1215 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 KLQ9UEF7 1012 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 CDH7Q9ULB5 785 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 CHKBQ9Y259 395 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 REXO2Q9Y3B8 237 aaKnown RBP5.04□□□□□ -1.6
TSR1-203ENST00000575049 PCDHB2Q9Y5E7 798 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 IQSEC2Q5JU85 1478 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 PLB1Q6P1J6 1458 aa5.04□□□□□ -1.6
TSR1-203ENST00000575049 DUOX2Q9NRD8 1548 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 IFT140Q96RY7 1462 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 GPR75-ASB3A0A0A6YYF3 556 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 SMIM30A4D0T7 59 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 IFNL4K9M1U5 179 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 PES1O00541 588 aaKnown RBP5.03□□□□□ -1.6
TSR1-203ENST00000575049 SLC25A17O43808 307 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 MITFO75030 526 aaPredicted RBP5.03□□□□□ -1.6
TSR1-203ENST00000575049 FZD7O75084 574 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 NCR1O76036 304 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 TPPPO94811 219 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 LETM1O95202 739 aaPredicted RBP5.03□□□□□ -1.6
TSR1-203ENST00000575049 KAT7O95251 611 aa5.03□□□□□ -1.6
TSR1-203ENST00000575049 IPO7O95373 1038 aaKnown RBP5.03□□□□□ -1.6
TSR1-203ENST00000575049 ALPPP05187 535 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms