RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 MMAAQ8IVH4 418 aaKnown RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 OR52K1Q8NGK4 314 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 PHF21BQ96EK2 531 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 AGAP2Q99490 1192 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 LGMNQ99538 433 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 MIR1-1HGQ9H1L0 117 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 CDT1Q9H211 546 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 EPS8L2Q9H6S3 715 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 REV3LO60673 3130 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 H0Y858 1186 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 KCNK1O00180 336 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 XYLBO75191 536 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 PARNO95453 639 aaKnown RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 TXNP10599 105 aaKnown RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 CYP3A5P20815 502 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 MYF6P23409 242 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 PSMB4P28070 264 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 PIGFQ07326 219 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 ATAD3BQ5T9A4 648 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 UBE2UQ5VVX9 321 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 NEPROQ6NW34 567 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 WDR49Q8IV35 697 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 TTC30BQ8N4P2 665 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 C1orf127Q8N9H9 656 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 DNAJB14Q8TBM8 379 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 RORBQ92753 470 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 SH3YL1Q96HL8 342 aaPredicted RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 VPS39Q96JC1 886 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 SNRNP25Q9BV90 132 aaKnown RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 PDZD7Q9H5P4 517 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 CACNA2D2Q9NY47 1150 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 ACOT9Q9Y305 439 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 IFT52Q9Y366 437 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 HES2Q9Y543 173 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 SPO11Q9Y5K1 396 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 ANKRD12Q6UB98 2062 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 TCAF2A6NFQ2 919 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 NFICP08651 508 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 STMN1P16949 149 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 CTGFP29279 349 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 HERC3Q15034 1050 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 EFCAB12Q6NXP0 572 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 C8orf59Q8N0T1 100 aaPredicted RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 SNX19Q92543 992 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 OMA1Q96E52 524 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 FAR2Q96K12 515 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 BDH2Q9BUT1 245 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 BCO2Q9BYV7 579 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 CDHR5Q9HBB8 845 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 NEK6Q9HC98 313 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 MOV10Q9HCE1 1003 aaKnown RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 CD320Q9NPF0 282 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 ORC6Q9Y5N6 252 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 RNF103O00237 685 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ZNF195O14628 629 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 CABYRO75952 493 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 JUNP05412 331 aaKnown RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 PRKCBP05771 671 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 INSRRP14616 1297 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ATP6V1B2P21281 511 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 CDH5P33151 784 aaPredicted RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 KPNA2P52292 529 aaKnown RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ZNF143P52747 638 aaPredicted RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 CAP1Q01518 475 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 SQLEQ14534 574 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 OXA1LQ15070 435 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 FAM187BQ17R55 369 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 BNIPLQ7Z465 357 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ARMC8Q8IUR7 673 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 PPTC7Q8NI37 304 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 PCDH19Q8TAB3 1148 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 CEP295NLQ96MC4 621 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 MROQ9BYG7 248 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 POMKQ9H5K3 350 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ITM2CQ9NQX7 267 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 GMPR2Q9P2T1 348 aaKnown RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 KLHL3Q9UH77 587 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 IPO11Q9UI26 975 aaKnown RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 TRAF6Q9Y4K3 522 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ANGPTL3Q9Y5C1 460 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 AGRPO00253 132 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ACKR2O00590 384 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 SUPT7LO94864 414 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 UGT2B4P06133 528 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 CXCL8P10145 99 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 MTHFD1P11586 935 aaKnown RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 NCK1P16333 377 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 IL7RP16871 459 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 POLR2EP19388 210 aaKnown RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 TRAP1Q12931 704 aaKnown RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 RAB6CQ53S08 254 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 TRNP1Q6NT89 227 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 CYP4V2Q6ZWL3 525 aaPredicted RBP9.6□□□□□ -0.87
CCDC40-212ENST00000574799 KCNMB4Q86W47 210 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 XYLT1Q86Y38 959 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ELMO2Q96JJ3 720 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 PEBP4Q96S96 227 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 CTRCQ99895 268 aa9.6□□□□□ -0.87
CCDC40-212ENST00000574799 ARPC5LQ9BPX5 153 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms