RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 LGMNQ99538 433 aa9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 BOCQ9BWV1 1114 aa9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 CLPBQ9H078 707 aa9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 WDR26Q9H7D7 661 aa9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 SUDS3Q9H7L9 328 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 ZNHIT6Q9NWK9 470 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 RCOR3Q9P2K3 495 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 B4GALT6Q9UBX8 382 aa9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 GPR34Q9UPC5 381 aa9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 PCDHGC4Q9Y5F7 938 aa9.69□□□□□ -0.86
NPLOC4-212ENST00000573328 A0A087WV48 116 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 A0A1W2PQ67 120 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 CFAP69A5D8W1 941 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 TRAFD1O14545 582 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 YY2O15391 372 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 AKR1B10O60218 316 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 MAFKO60675 156 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 CD48P09326 243 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 H2AFZP0C0S5 128 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 VIPR1P32241 457 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 KIAA1024LP59773 190 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 CCDC173Q0VFZ6 552 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 TRAF2Q12933 501 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 SPIDRQ14159 915 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 DPYSL3Q14195 570 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 AGERQ15109 404 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 CNGA3Q16281 694 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 SKOR2Q2VWA4 1001 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 PERM1Q5SV97 790 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 ARMC12Q5T9G4 340 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 CDCP2Q5VXM1 449 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 SPECC1LQ69YQ0 1117 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 TIGD7Q6NT04 549 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 RBM44Q6ZP01 1051 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 USP45Q70EL2 814 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 H2AFVQ71UI9 128 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 NDUFAF2Q8N183 169 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 PGBD5Q8N414 524 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 ARL10Q8N8L6 244 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 KYQ8NBH2 561 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 OR56A4Q8NGH8 313 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 TPCN2Q8NHX9 752 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 FUBP1Q96AE4 644 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 CCDC3Q9BQI4 270 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 MGME1Q9BQP7 344 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 ANP32EQ9BTT0 268 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 NOD2Q9HC29 1040 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 UVRAGQ9P2Y5 699 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 PADI4Q9UM07 663 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 SCN8AQ9UQD0 1980 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 IGSF10Q6WRI0 2623 aa9.68□□□□□ -0.86
NPLOC4-212ENST00000573328 LOC400499M0QZD8 3231 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 BPTFQ12830 3046 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 TMEM202A6NGA9 273 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 EIF4E1BA6NMX2 242 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 B4DGG1 531 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 HTRA2O43464 458 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 PROSCO94903 275 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 KRT7P08729 469 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 KRT10P13645 584 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 CTPS1P17812 591 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 ITPKBP27987 946 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 EIF2S3P41091 472 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 GARSP41250 739 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 EPHB1P54762 984 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 PCBP4P57723 403 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 SLC18A3Q16572 532 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 ISXQ2M1V0 245 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 TBC1D25Q3MII6 688 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 ATP13A4Q4VNC1 1196 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 ODF2Q5BJF6 829 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 RALGPS1Q5JS13 557 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 NCBP2-AS2Q69YL0 99 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 RAET1GQ6H3X3 334 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 NYAP1Q6ZVC0 841 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 TAF8Q7Z7C8 310 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 CPNE8Q86YQ8 564 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 MAP7D3Q8IWC1 876 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 LSMEM2Q8N112 164 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 SDR16C5Q8N3Y7 309 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 SNIP1Q8TAD8 396 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 WDR48Q8TAF3 677 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 OR1E3Q8WZA6 343 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 FGF11Q92914 225 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 ATXN7L3BQ96GX2 97 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 NAF1Q96HR8 494 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 ZNF830Q96NB3 372 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 SEMA3CQ99985 751 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 ZNF670Q9BS34 389 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 PACSIN1Q9BY11 444 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 POLR1EQ9GZS1 481 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 TSPY26PQ9H489 355 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 POLR1BQ9H9Y6 1135 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 CYP4F12Q9HCS2 524 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 MRPL40Q9NQ50 206 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 PHPT1Q9NRX4 125 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms