RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 HDHD5Q9BXW7 423 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 ARHGAP39Q9C0H5 1083 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 ZNF304Q9HCX3 659 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 Q9N2J8 555 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 G6PC2Q9NQR9 355 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 TMEM248Q9NWD8 314 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 CTNNA3Q9UI47 895 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 AGTPBP1Q9UPW5 1226 aa4.33□□□□□ -1.72
NUP88-202ENST00000570937 IPO5O00410 1097 aaKnown RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 FAM155BO75949 473 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 TSPY3P0CV98 308 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 TSPY8P0CW00 308 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 CHN1P15882 459 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 HTR6P50406 440 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 HMGCS2P54868 508 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 NANOS2P60321 138 aaKnown RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 CCNA1P78396 465 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 GABPAQ06546 454 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 ALKBH1Q13686 389 aaKnown RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 TRIM14Q14142 442 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 ALX1Q15699 326 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 HMBOX1Q6NT76 420 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 JMJD6Q6NYC1 403 aaPredicted RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 FBXO46Q6PJ61 603 aaPredicted RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 CASC1Q6TDU7 716 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 PARM1Q6UWI2 310 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 CWC27Q6UX04 472 aaKnown RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 RRAGAQ7L523 313 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 SCN4BQ8IWT1 228 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 FAM185AQ8N0U4 392 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 TMEM217Q8N7C4 229 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 KDM1BQ8NB78 822 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 DYNLL2Q96FJ2 89 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 TWSG1Q9GZX9 223 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 RNF41Q9H4P4 317 aaPredicted RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 DNAJC18Q9H819 358 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 SEPSECSQ9HD40 501 aaKnown RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 SIRT3Q9NTG7 399 aaPredicted RBP4.32□□□□□ -1.72
NUP88-202ENST00000570937 HOXC10Q9NYD6 342 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 KCND3Q9UK17 655 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 TRIM17Q9Y577 477 aa4.32□□□□□ -1.72
NUP88-202ENST00000570937 CKAP5Q14008 2032 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 CCDC171Q6TFL3 1326 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 TCRBV7S3A2A0A539 114 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 TMEM247A6NEH6 219 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 E7EVH7 732 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 TNPO2O14787 897 aaKnown RBP4.31□□□□□ -1.72
NUP88-202ENST00000570937 SMAD6O43541 496 aaKnown RBP4.31□□□□□ -1.72
NUP88-202ENST00000570937 RANBP6O60518 1105 aaKnown RBP4.31□□□□□ -1.72
NUP88-202ENST00000570937 TFRCP02786 760 aaKnown RBP4.31□□□□□ -1.72
NUP88-202ENST00000570937 CCKARP32238 428 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 PSMC4P43686 418 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 COG2Q14746 738 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 IMMTQ16891 758 aaKnown RBP4.31□□□□□ -1.72
NUP88-202ENST00000570937 GXYLT1Q4G148 440 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 CCDC174Q6PII3 467 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 C17orf99Q6UX52 265 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 MFSD6Q6ZSS7 791 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 BHLHA9Q7RTU4 235 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 GALNT7Q86SF2 657 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 ANKRD13CQ8N6S4 541 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 GPRC5AQ8NFJ5 357 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 RAET1EQ8TD07 263 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 TRAPPC12Q8WVT3 735 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 ABHD8Q96I13 439 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 C12orf42Q96LP6 360 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 FRG2BQ96QU4 278 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 SEC62Q99442 399 aaKnown RBP4.31□□□□□ -1.72
NUP88-202ENST00000570937 TRIM31Q9BZY9 425 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 ACTR5Q9H9F9 607 aaPredicted RBP4.31□□□□□ -1.72
NUP88-202ENST00000570937 SAYSD1Q9NPB0 183 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 TBC1D14Q9P2M4 693 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 SLC25A13Q9UJS0 675 aa4.31□□□□□ -1.72
NUP88-202ENST00000570937 DOCK2Q92608 1830 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 ZMYM6O95789 1325 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 RAD50Q92878 1312 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 EVPLQ92817 2033 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 A0A0D9SFI3 127 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 HMX3A6NHT5 357 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 TSPY2A6NKD2 308 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 H0YGN5 161 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 WDR46O15213 610 aaKnown RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 SEPT4O43236 478 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 EIF5BO60841 1220 aaKnown RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 HSPD1P10809 573 aaKnown RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 EEF2P13639 858 aaKnown RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 ACP5P13686 325 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 AKR1B1P15121 316 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 CAPN2P17655 700 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 KLRC2P26717 231 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 GSTM2P28161 218 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 TYK2P29597 1187 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 MAPK4P31152 587 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 ARRB2P32121 409 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 RFX2P48378 723 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 CYP2J2P51589 502 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 TFAP4Q01664 338 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 TRDNQ13061 729 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms