RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CHRNB1P11230 501 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ADRB3P13945 408 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CTPS1P17812 591 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 IVDP26440 423 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 MGAT1P26572 445 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 VIPR1P32241 457 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 SLC8A1P32418 973 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 PHBP35232 272 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ADRA1AP35348 466 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CHRNA4P43681 627 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 RPS9P46781 194 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 SCTRP47872 440 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 NPY2RP49146 381 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CCR3P51677 355 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 SUOXP51687 545 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 FAM193AP78312 1265 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 SATB1Q01826 763 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZBTB16Q05516 673 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 OLIG2Q13516 323 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 BRD3Q15059 726 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CRY1Q16526 586 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CCDC38Q502W7 563 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ARMC3Q5W041 872 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 DENND2CQ68D51 928 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ANO7Q6IWH7 933 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 KIAA1211LQ6NV74 962 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZDHHC24Q6UX98 284 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ERN2Q76MJ5 926 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 PARS2Q7L3T8 475 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 SYT13Q7L8C5 426 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 NLRP9Q7RTR0 991 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 TTC7BQ86TV6 843 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 KBTBD6Q86V97 674 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CCNJLQ8IV13 435 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 KLHDC8BQ8IXV7 354 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 OTUD6BQ8N6M0 293 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 FBXO36Q8NEA4 188 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 HCAR2Q8TDS4 363 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CXorf40AQ8TE69 158 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 PYROXD1Q8WU10 500 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 EDAQ92838 391 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 RAB7BQ96AH8 199 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 TADA1Q96BN2 335 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ITPKCQ96DU7 683 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 STAMBPL1Q96FJ0 436 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CFAP36Q96G28 342 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 SPACA7Q96KW9 195 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 HHIPQ96QV1 700 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 TRIB3Q96RU7 358 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 RUFY1Q96T51 708 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CHRDQ9H2X0 955 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 PABPC3Q9H361 631 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 TRABDQ9H4I3 376 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 VPS37BQ9H9H4 285 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CD320Q9NPF0 282 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CASS4Q9NQ75 786 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZDHHC18Q9NUE0 388 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 SYBUQ9NX95 663 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 DKK3Q9UBP4 350 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZC3H7BQ9UGR2 993 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 PPM1HQ9ULR3 514 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 CHMP2BQ9UQN3 213 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZNF711Q9Y462 761 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 DOCK8Q8NF50 2099 aa6.61□□□□□ -1.35
CTDNEP1-204ENST00000570484 A0A0J9YYE9 177 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 LOC285095A0A1B0GVY8 99 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 A0A1W2PP55 124 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 A0A1W2PQF6 199 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 CCDC78A2IDD5 438 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 TMEM221A6NGB7 291 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 ANKRD66B4E2M5 251 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 M0R296 226 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 TRAFD1O14545 582 aaPredicted RBP6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 MID1O15344 667 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 STX7O15400 261 aaKnown RBP6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 FZD6O60353 706 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 AVILO75366 819 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 SPAG6O75602 509 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 APBB3O95704 486 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 TTC4O95801 387 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 TRBC1P01850 177 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 PRKCGP05129 697 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 DCNP07585 359 aaKnown RBP6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 PDHA1P08559 390 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 ALPIP09923 528 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 PIRTP0C851 137 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 ZNF30P17039 623 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 TPH1P17752 444 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 ADRA1DP25100 572 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 ECHS1P30084 290 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 STX2P32856 288 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 P2RY2P41231 377 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 ELK3P41970 407 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 GRIA1P42261 906 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 MAGEA4P43358 317 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 COPAP53621 1224 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 PMS2P54278 862 aa6.6□□□□□ -1.35
CTDNEP1-204ENST00000570484 RPS14P62263 151 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms