RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 VPS36Q86VN1 386 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 CBWD2Q8IUF1 395 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 TMEM139Q8IV31 216 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 WDR49Q8IV35 697 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 TXNDC5Q8NBS9 432 aaKnown RBP7.36□□□□□ -1.23
CNOT1-222ENST00000570139 FBXL13Q8NEE6 735 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 SAAL1Q96ER3 474 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 LCORQ96JN0 433 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-222ENST00000570139 GLT1D1Q96MS3 346 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 PNKPQ96T60 521 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 CPPED1Q9BRF8 314 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-222ENST00000570139 GANQ9H2C0 597 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 SERHL2Q9H4I8 314 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 FAM124BQ9H5Z6 455 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-222ENST00000570139 ASB7Q9H672 318 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 FAM207AQ9NSI2 230 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-222ENST00000570139 HAUS2Q9NVX0 235 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 PLA2G3Q9NZ20 509 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 HDAC6Q9UBN7 1215 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 CPSF3Q9UKF6 684 aaKnown RBP7.36□□□□□ -1.23
CNOT1-222ENST00000570139 COQ4Q9Y3A0 265 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 NEU2Q9Y3R4 380 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 IRAK3Q9Y616 596 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 SQORQ9Y6N5 450 aa7.36□□□□□ -1.23
CNOT1-222ENST00000570139 A0A1B0GUA9 196 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 DRGXA6NNA5 263 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 LRRIQ3A6PVS8 624 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-222ENST00000570139 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-222ENST00000570139 KBTBD13C9JR72 458 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 KLK10O43240 276 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 AHCYL1O43865 530 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 FAM189A1O60320 539 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 DOK2O60496 412 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 TSPAN1O60635 241 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 IPO13O94829 963 aaKnown RBP7.35□□□□□ -1.23
CNOT1-222ENST00000570139 PGK1P00558 417 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 VTNP04004 478 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 SERPING1P05155 500 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 ADRB2P07550 413 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CLTAP09496 248 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 TRIM49P0CI25 452 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 TRIM49CP0CI26 452 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 ACADMP11310 421 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 UCHL3P15374 230 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 FERP16591 822 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 TGM1P22735 817 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 PON1P27169 355 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CCND3P30281 292 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-222ENST00000570139 PAFAH1B1P43034 410 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 ACLYP53396 1101 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 RAC3P60763 192 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 KRT83P78385 493 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CAP1Q01518 475 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 GCNT1Q02742 428 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 LRMPQ12912 555 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 E2F2Q14209 437 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 KCNA10Q16322 511 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CBWD6Q4V339 395 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CBWD3Q5JTY5 395 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 ZNF569Q5MCW4 686 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CBWD5Q5RIA9 395 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 SFMBT2Q5VUG0 894 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 SFRP4Q6FHJ7 346 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-222ENST00000570139 TMEM108Q6UXF1 575 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 C15orf39Q6ZRI6 1047 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CBLL1Q75N03 491 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CATSPER4Q7RTX7 472 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 SERINC5Q86VE9 423 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 SLC15A3Q8IY34 581 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 HACE1Q8IYU2 909 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 POC1BQ8TC44 478 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 TAF4BQ92750 862 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 KTI12Q96EK9 354 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-222ENST00000570139 WDR24Q96S15 920 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.35□□□□□ -1.23
CNOT1-222ENST00000570139 INTS2Q9H0H0 1204 aaKnown RBP7.35□□□□□ -1.23
CNOT1-222ENST00000570139 GHITMQ9H3K2 345 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 PDZD7Q9H5P4 517 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 CXorf36Q9H7Y0 433 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 GCM1Q9NP62 436 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 AGPAT5Q9NUQ2 364 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 AIPL1Q9NZN9 384 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 TRIM17Q9Y577 477 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 TRPV2Q9Y5S1 764 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 EVPLQ92817 2033 aa7.35□□□□□ -1.23
CNOT1-222ENST00000570139 MROH7Q68CQ1 1323 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 SH3D21A4FU49 640 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 GOLGA8IPA6NC78 632 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 MYADML2A6NDP7 307 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 ZNF503-AS2A6NEH8 195 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 FAM90A20PA6NIJ5 464 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 LRRC53A6NM62 1247 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 GOLGA8JA6NMD2 632 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 EIF3CLB5ME19 914 aaKnown RBP7.34□□□□□ -1.23
CNOT1-222ENST00000570139 E7ENX8 843 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 DNM1LO00429 736 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 KIAA0355O15063 1070 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 B4GALT4O60513 344 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 NOL4O94818 638 aa7.34□□□□□ -1.23
CNOT1-222ENST00000570139 TNNC2P02585 160 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms