RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 hCG_1818297A0A087WSY0 165 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 C1QTNF9BB2RNN3 333 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-220ENST00000569916 SCAMP1O15126 338 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 PJA2O43164 708 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 RFPL3O75679 317 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 JCHAINP01591 159 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 MMP2P08253 660 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 ALPIP09923 528 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 C1QTNF9P0C862 333 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 CYP2A6P11509 494 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-220ENST00000569916 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-220ENST00000569916 JUNDP17535 347 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 CKMT2P17540 419 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 CTPS1P17812 591 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 NFKBIAP25963 317 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 PEX5P50542 639 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 ADCY2Q08462 1091 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 AP1B1Q10567 949 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 NFATC4Q14934 902 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 ACOX1Q15067 660 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 PDK1Q15118 436 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 LLGL1Q15334 1064 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 CCDC157Q569K6 752 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 TFDP3Q5H9I0 405 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 FAM182AQ5T1J6 154 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 KAZNQ674X7 775 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 ESRP1Q6NXG1 681 aaKnown RBP13.06□□□□□ -0.32
CNOT1-220ENST00000569916 DHRS13Q6UX07 377 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 UNQ6494/PRO21346Q6UXR6 183 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 NYAP1Q6ZVC0 841 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 USP45Q70EL2 814 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 TMPRSS7Q7RTY8 843 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 TSPAN33Q86UF1 283 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 PHACTR4Q8IZ21 702 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 PELI3Q8N2H9 469 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 CBARPQ8N350 705 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-220ENST00000569916 NUS1Q96E22 293 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 CALR3Q96L12 384 aaKnown RBP13.06□□□□□ -0.32
CNOT1-220ENST00000569916 SMIM14Q96QK8 99 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 LRRC61Q9BV99 259 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 CEP41Q9BYV8 373 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 SAE1Q9UBE0 346 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-220ENST00000569916 OR1A2Q9Y585 309 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 CSNK1G3Q9Y6M4 447 aa13.06□□□□□ -0.32
CNOT1-220ENST00000569916 COL27A1Q8IZC6 1860 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-220ENST00000569916 MYLKQ15746 1914 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 ACACBO00763 2458 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 FRYQ5TBA9 3013 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 SCN8AQ9UQD0 1980 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 LY6G6EA0A0G2JKS1 128 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 A0A0J9YYE9 177 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 A0A0U1RQS6 177 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 NEMP2A6NFY4 417 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 CAPN8A6NHC0 703 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 K7ESM1 405 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 PSMD11O00231 422 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 AQP9O43315 295 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 CST8O60676 142 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 ZRANB2O95218 330 aaKnown RBP eCLIP13.05□□□□□ -0.32
CNOT1-220ENST00000569916 PRLP01236 227 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 TRBC1P01850 177 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 C1SP09871 688 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 ALPPL2P10696 532 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 TGM2P21980 687 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 ACP1P24666 158 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 CTNNA1P35221 906 aaKnown RBP13.05□□□□□ -0.32
CNOT1-220ENST00000569916 HNF1BP35680 557 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 CD86P42081 329 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 NR2C2P49116 596 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 KIAA1024LP59773 190 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 SKOR1P84550 965 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 TFDP2Q14188 446 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 PRKD1Q15139 912 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-220ENST00000569916 SMAD1Q15797 465 aaKnown RBP13.05□□□□□ -0.32
CNOT1-220ENST00000569916 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 B4GALNT4Q76KP1 1039 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 HSD11B1LQ7Z5J1 315 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 EXD1Q8NHP7 514 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 LMX1AQ8TE12 382 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 BTN2A2Q8WVV5 523 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 FUBP1Q96AE4 644 aaKnown RBP13.05□□□□□ -0.32
CNOT1-220ENST00000569916 DTD2Q96FN9 168 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 RBM41Q96IZ5 413 aaKnown RBP13.05□□□□□ -0.32
CNOT1-220ENST00000569916 TBATAQ96M53 351 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 BRD8Q9H0E9 1235 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 CHKBQ9Y259 395 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
CNOT1-220ENST00000569916 U3KQA8 63 aa13.05□□□□□ -0.32
CNOT1-220ENST00000569916 MAP1BP46821 2468 aaKnown RBP13.04□□□□□ -0.32
CNOT1-220ENST00000569916 A0A0U1RQJ8 604 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 GCATO75600 419 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 CA4P22748 312 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 HTR1BP28222 390 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 TRIM23P36406 574 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 ETV3P41162 512 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 HK3P52790 923 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 EPHB1P54762 984 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 DAB2P98082 770 aa13.04□□□□□ -0.32
CNOT1-220ENST00000569916 PPARDQ03181 441 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms