RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 APOC4-APOC2K7ER74 178 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 PSMD11O00231 422 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 MTSS1O43312 755 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 TNFSF14O43557 240 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 KRT86O43790 486 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 PIAS2O75928 621 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 HEXIM1O94992 359 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 TRIM16O95361 564 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 PRLP01236 227 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 TRBC1P01850 177 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 APOC2P02655 101 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 CSF2P04141 144 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 MMP2P08253 660 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 CTPS1P17812 591 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 DGKAP23743 735 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 PTPN7P35236 360 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 CD86P42081 329 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 RPL26P61254 145 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 HNRNPKP61978 463 aaKnown RBP eCLIP13.85□□□□□ -0.198e-13■■■□□ 16.8
HERPUD1-218ENST00000569569 SKOR1P84550 965 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 MTM1Q13496 603 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 INPP5AQ14642 412 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 ACOX1Q15067 660 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 PRKD1Q15139 912 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 CNGA3Q16281 694 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 B4GALNT4Q76KP1 1039 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 ZC3H18Q86VM9 953 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 CBARPQ8N350 705 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 EID2Q8N6I1 236 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 UBL4BQ8N7F7 174 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 AGAP3Q96P47 875 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 APOOQ9BUR5 198 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 CEP41Q9BYV8 373 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 OSBPL8Q9BZF1 889 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 SLC25A51Q9H1U9 297 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 GRPEL1Q9HAV7 217 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 PCDH9Q9HC56 1237 aa13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 RPL26L1Q9UNX3 145 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 APOBEC2Q9Y235 224 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-218ENST00000569569 ARHGEF17Q96PE2 2063 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 NPIPB15A6NHN6 443 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 H3BM21 787 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 NRDCO43847 1150 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 SDC3O75056 442 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 ALPIP09923 528 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 PYGMP11217 842 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 NME1P15531 152 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 GM2AP17900 193 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 LHCGRP22888 699 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 PTPN3P26045 913 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 HNF1BP35680 557 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 EIF2B5Q13144 721 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 XRCC4Q13426 336 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 ZNF542PQ5EBM4 170 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 TPRG1LQ5T0D9 272 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 CCDC181Q5TID7 509 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 DENND2CQ68D51 928 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 KDM7AQ6ZMT4 941 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 MACC1Q6ZN28 852 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 SLC25A45Q8N413 288 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 UBE2Q2Q8WVN8 375 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 BTN2A2Q8WVV5 523 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 ALG3Q92685 438 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 HAUS1Q96CS2 278 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 IMP4Q96G21 291 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 TEKT5Q96M29 485 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 COQ10AQ96MF6 247 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 VAT1Q99536 393 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 FTSJ1Q9UET6 329 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 DNPEPQ9ULA0 475 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 GUCA1BQ9UMX6 200 aa13.84□□□□□ -0.19
HERPUD1-218ENST00000569569 ZFC3H1O60293 1989 aaKnown RBP13.83□□□□□ -0.19
HERPUD1-218ENST00000569569 GOLGA6L3A6NEY3 463 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 NEMP2A6NFY4 417 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 ANKRD66B4E2M5 251 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 TJP3O95049 919 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 LDOC1O95751 146 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 FTCDO95954 541 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 PCCBP05166 539 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 ZNF30P17039 623 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 JUNDP17535 347 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 HTR1BP28222 390 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 TRIM23P36406 574 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 WASHC5Q12768 1159 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 FOXC1Q12948 553 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 NOMO1Q15155 1222 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 SLC14A2Q15849 920 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 HS1BP3Q53T59 392 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 FAM182AQ5T1J6 154 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 CRTC1Q6UUV9 634 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 TSPAN33Q86UF1 283 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 PLA2G15Q8NCC3 412 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 LPCAT1Q8NF37 534 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 ATL2Q8NHH9 583 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 HTR3CQ8WXA8 447 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 NUS1Q96E22 293 aa13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 CNDP2Q96KP4 475 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-218ENST00000569569 LYSMD1Q96S90 227 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms