RNA–Protein interactions for RNA: ENST00000568989.1

UBE2I-219, Transcript of ubiquitin conjugating enzyme E2 I, human

TSL 2

Gene UBE2I, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2I-219	ENST00000568989	CACNB4	O00305	520 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	TNFRSF10C	O14798	259 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	LRCH4	O75427	683 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	PCCB	P05166	539 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	CELA2B	P08218	269 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	HOXC4	P09017	264 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	ELFN1	P0C7U0	828 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	MYBL1	P10243	752 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	TCF4	P15884	667 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	RENBP	P51606	427 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	AP1S1	P61966	158 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	BCL2L1	Q07817	233 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	TDRD12	Q587J7	1177 aa	Known RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	AFMID	Q63HM1	303 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	SPECC1L	Q69YQ0	1117 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	INO80C	Q6PI98	192 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	RFX8	Q6ZV50	586 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	VSTM4	Q8IW00	320 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	PAF1	Q8N7H5	531 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	TSEN2	Q8NCE0	465 aa	Known RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	OR56A4	Q8NGH8	313 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	ECHDC3	Q96DC8	303 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	TMEM74	Q96NL1	305 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	DNAJC7	Q99615	494 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	SNRNP25	Q9BV90	132 aa	Known RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	SLC39A8	Q9C0K1	460 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	PCSK1N	Q9UHG2	260 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	PCDHGA7	Q9Y5G6	932 aa		13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	HELZ2	Q9BYK8	2649 aa	Known RBP	13.59	□□□□□ -0.23
UBE2I-219	ENST00000568989	PDE2A	O00408	941 aa	Predicted RBP	13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	PRPSAP2	O60256	369 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	RNF8	O76064	485 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	RECQL5	O94762	991 aa	Predicted RBP	13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	CYP1A2	P05177	515 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	PLA2G2A	P14555	144 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	PNLIP	P16233	465 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	NFKBIA	P25963	317 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	IL1R2	P27930	398 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	CCKBR	P32239	447 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	HCAR3	P49019	387 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	INHBC	P55103	352 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	IL10RB	Q08334	325 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	TSR1	Q2NL82	804 aa	Known RBP	13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	TMCO4	Q5TGY1	634 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	ALKBH5	Q6P6C2	394 aa	Known RBP	13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	DPPA4	Q7L190	304 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	ZSWIM9	Q86XI8	627 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	FBXO39	Q8N4B4	442 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	LZTR1	Q8N653	840 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	GPR156	Q8NFN8	814 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	OR8K1	Q8NGG5	319 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	TMEM159	Q96B96	161 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	TRIM11	Q96F44	468 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	PDXP	Q96GD0	296 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	BTBD6	Q96KE9	485 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	KCTD15	Q96SI1	283 aa	Predicted RBP	13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	EPB41L5	Q9HCM4	733 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	KCTD5	Q9NXV2	234 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	SEPT3	Q9UH03	358 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	APPL1	Q9UKG1	709 aa		13.58	□□□□□ -0.24
UBE2I-219	ENST00000568989	TDRD6	O60522	2096 aa	Known RBP	13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989		A0A1W2PQ67	120 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	DFFA	O00273	331 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	CBFA2T2	O43439	604 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	RPLP0	P05388	317 aa	Known RBP	13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	GLB1	P16278	677 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	ERCC2	P18074	760 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	UGT1A5	P35504	534 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	TRIM23	P36406	574 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	HSPA9	P38646	679 aa	Known RBP	13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	RGR	P47804	291 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	CCL7	P80098	99 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	RALGDS	Q12967	914 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	TBX2	Q13207	712 aa	Predicted RBP	13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	CLN3	Q13286	438 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	CCDC122	Q5T0U0	273 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	CERCAM	Q5T4B2	595 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	TXNRD3NB	Q6F5E7	133 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	OGFOD3	Q6PK18	319 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	LIPI	Q6XZB0	460 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	CCDC81	Q6ZN84	652 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	RAB11FIP2	Q7L804	512 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	TAF8	Q7Z7C8	310 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	CCNJL	Q8IV13	435 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	ARHGAP12	Q8IWW6	846 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	TTC9	Q92623	222 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	ZNF599	Q96NL3	588 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	PSKH2	Q96QS6	385 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	CHP1	Q99653	195 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	LRRN3	Q9H3W5	708 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	WDR26	Q9H7D7	661 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	ZWILCH	Q9H900	591 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	MRPL47	Q9HD33	250 aa	Known RBP	13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	RABGEF1	Q9UJ41	708 aa		13.57	□□□□□ -0.24
UBE2I-219	ENST00000568989	ACSL6	Q9UKU0	697 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms