RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	CD160	O95971	181 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	CCNB1	P14635	433 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	SYT1	P21579	422 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	BMP6	P22004	513 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	SUOX	P51687	545 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	GEMIN4	P57678	1058 aa	Known RBP	13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	GNA12	Q03113	381 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	RAD51	Q06609	339 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	ILF3	Q12906	894 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	AGER	Q15109	404 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	NR6A1	Q15406	480 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	EFHC1	Q5JVL4	640 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	BRMS1L	Q5PSV4	323 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	ANKRD40	Q6AI12	368 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	SPNS2	Q8IVW8	549 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	PPM1K	Q8N3J5	372 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	CCDC47	Q96A33	483 aa	Known RBP	13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	NT5C1B	Q96P26	610 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	TRIM55	Q9BYV6	548 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	ASNSD1	Q9NWL6	643 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	RRN3	Q9NYV6	651 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	TAAR2	Q9P1P5	351 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	SERTAD1	Q9UHV2	236 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	ITGB1BP2	Q9UKP3	347 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	SNX10	Q9Y5X0	201 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	NF1	P21359	2839 aa		13.82	□□□□□ -0.2
SMG1-213	ENST00000567737	CXorf51A	A0A1B0GTR3	108 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	PRSS38	A1L453	326 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	PIPSL	A2A3N6	862 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	CETN3	O15182	167 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	PPM1D	O15297	605 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	CREG1	O75629	220 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	GRAP2	O75791	330 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	PEX6	Q13608	980 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	RAPGEF1	Q13905	1077 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	ELOA	Q14241	798 aa	Known RBP	13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	PLA2G15	Q8NCC3	412 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	OR10G6	Q8NH81	332 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	ARHGEF2	Q92974	986 aa	Known RBP	13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	VOPP1	Q96AW1	172 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	HMCES	Q96FZ2	354 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	ZNF396	Q96N95	335 aa	Predicted RBP	13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	ULBP3	Q9BZM4	244 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	CARS2	Q9HA77	564 aa	Known RBP	13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	ARHGEF38	Q9NXL2	777 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	PDP2	Q9P2J9	529 aa		13.81	□□□□□ -0.2
SMG1-213	ENST00000567737	APC	P25054	2843 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	IGLV3-10	A0A075B6K4	115 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	MED7	O43513	233 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	DPM1	O60762	260 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	SRGAP2	O75044	1071 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	YEATS4	O95619	227 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	RECK	O95980	971 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	ETFB	P38117	255 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	LIG3	P49916	1009 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	DNM1	Q05193	864 aa	Known RBP	13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	PDCL	Q13371	301 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	THSD4	Q6ZMP0	1018 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	LYSMD3	Q7Z3D4	306 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	ARHGAP22	Q7Z5H3	698 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	SLC47A2	Q86VL8	602 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	NRROS	Q86YC3	692 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	DRC7	Q8IY82	874 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	NAGS	Q8N159	534 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	GUF1	Q8N442	669 aa	Known RBP	13.8	□□□□□ -0.2
SMG1-213	ENST00000567737		Q8NA96	180 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	PATE1	Q8WXA2	126 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	KAT5	Q92993	513 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	KCTD12	Q96CX2	325 aa	Known RBP	13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	STAMBPL1	Q96FJ0	436 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	C1orf74	Q96LT6	269 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	GDAP1L1	Q96MZ0	367 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	ANLN	Q9NQW6	1124 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	ACSS2	Q9NR19	701 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	ZNF451	Q9Y4E5	1061 aa		13.8	□□□□□ -0.2
SMG1-213	ENST00000567737	HEATR9	A2RTY3	570 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	PDE2A	O00408	941 aa	Predicted RBP	13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	CBX6	O95503	412 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	MYL1	P05976	194 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	HOXC4	P09017	264 aa	Predicted RBP	13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	CASP14	P31944	242 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	MEA1	Q16626	185 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	ZCWPW2	Q504Y3	356 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	SP5	Q6BEB4	398 aa	Predicted RBP	13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	ERAP2	Q6P179	960 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	SLC30A9	Q6PML9	568 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	ZYG11B	Q9C0D3	744 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	WDR26	Q9H7D7	661 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	MLXIPL	Q9NP71	852 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	PIGV	Q9NUD9	493 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	ZNF212	Q9UDV6	495 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	TSR3	Q9UJK0	312 aa	Known RBP	13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	HPCAL4	Q9UM19	191 aa		13.79	□□□□□ -0.2
SMG1-213	ENST00000567737	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.79	□□□□□ -0.2

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