RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 USP7Q93009 1102 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 SGF29Q96ES7 293 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 TRIM4Q9C037 500 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 CYP4F12Q9HCS2 524 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 SPTA1P02549 2419 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 NAV2Q8IVL1 2488 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 ZFC3H1O60293 1989 aaKnown RBP23■■□□□ 1.27
CNEP1R1-209ENST00000567712 CFAP69A5D8W1 941 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 C9orf172C9J069 976 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 PALMO75781 387 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 WISP1O95388 367 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 LIPCP11150 499 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 AIF1P55008 147 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 KCNC4Q03721 635 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 C16orf72Q14CZ0 275 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 FKBP15Q5T1M5 1219 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 CFAP58Q5T655 872 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 SPECC1LQ69YQ0 1117 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 CYP4V2Q6ZWL3 525 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 USP53Q70EK8 1073 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 DPPA4Q7L190 304 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 PRICKLE2Q7Z3G6 844 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 NRROSQ86YC3 692 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 ATL2Q8NHH9 583 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 KCTD15Q96SI1 283 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 RDH14Q9HBH5 336 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 SPATS2LQ9NUQ6 558 aaKnown RBP22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 AP4E1Q9UPM8 1137 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 ST14Q9Y5Y6 855 aa22.99■■□□□ 1.27
CNEP1R1-209ENST00000567712 CACNB4O00305 520 aaPredicted RBP22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 ELFN1P0C7U0 828 aa22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 PNLIPP16233 465 aa22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 SERPINA4P29622 427 aa22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 MAPK10P53779 464 aa22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 MAZP56270 477 aaKnown RBP22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 CYP4F2P78329 520 aa22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 ACAD10Q6JQN1 1059 aa22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 ZNF574Q6ZN55 896 aaPredicted RBP22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 DPEP2Q9H4A9 486 aa22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 DHX35Q9H5Z1 703 aaKnown RBP22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 ATP13A3Q9H7F0 1226 aa22.98■■□□□ 1.27
CNEP1R1-209ENST00000567712 ARHGAP42A6NI28 874 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 EEF2KO00418 725 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 TNFRSF10CO14798 259 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 TEX33O43247 280 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 ATMINO43313 823 aaPredicted RBP22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 HOXC4P09017 264 aaPredicted RBP22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 FAM87AP0C7U9 286 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 ARSDP51689 593 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 OR1D5P58170 312 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 PNCKQ6P2M8 343 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 DCUN1D2Q6PH85 259 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 DTX1Q86Y01 620 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 NEK11Q8NG66 645 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 HTR3CQ8WXA8 447 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 PMEPA1Q969W9 287 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 SYT11Q9BT88 431 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 SNRNP25Q9BV90 132 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 TRIM7Q9C029 511 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 B4GALT6Q9UBX8 382 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 PCSK1NQ9UHG2 260 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 MOSPD1Q9UJG1 213 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 PCDHGA4Q9Y5G9 962 aa22.97■■□□□ 1.27
CNEP1R1-209ENST00000567712 COL12A1Q99715 3063 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 PRSS38A1L453 326 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 CCL4P13236 92 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 ERCC2P18074 760 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 SCNN1BP51168 640 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 BCL2L1Q07817 233 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 MAMLD1Q13495 774 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 PTPRRQ15256 657 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 PHF19Q5T6S3 580 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 APTXQ7Z2E3 356 aaKnown RBP22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 C17orf82Q86X59 251 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 COQ10AQ96MF6 247 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 PCMTD1Q96MG8 357 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 CINPQ9BW66 212 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 SUDS3Q9H7L9 328 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 STARD5Q9NSY2 213 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 CHMP5Q9NZZ3 219 aa22.96■■□□□ 1.27
CNEP1R1-209ENST00000567712 ANKRD62A6NC57 917 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 LGALS16A8MUM7 142 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 DFFAO00273 331 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 NUDT21O43809 227 aaKnown RBP22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 FGF1P05230 155 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 AK4P27144 223 aaPredicted RBP22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 HTR7P34969 479 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 SLC10A7Q0GE19 358 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 ARHGEF7Q14155 803 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 ACOX1Q15067 660 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 AMZ1Q400G9 498 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 MANEAQ5SRI9 462 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 RFX8Q6ZV50 586 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 RCBTB1Q8NDN9 531 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 GPBAR1Q8TDU6 330 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 PATE1Q8WXA2 126 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 JPH3Q8WXH2 748 aaPredicted RBP22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 NUDT22Q9BRQ3 303 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 HSD3B7Q9H2F3 369 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 WDR26Q9H7D7 661 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms