RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ZYG11AQ6WRX3 759 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 QKIQ96PU8 341 aaKnown RBP eCLIP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 B3GNT5Q9BYG0 378 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 ALG2Q9H553 416 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 TNPO3Q9Y5L0 923 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 FAM240BA0A1B0GVZ2 78 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC25A27O95847 323 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 CST3P01034 146 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 ZNF7P17097 686 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 PAICSP22234 425 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC7A1P30825 629 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 GPX6P59796 221 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 EIF3MQ7L2H7 374 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 PIGZQ86VD9 579 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 TREML1Q86YW5 311 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 CANT1Q8WVQ1 401 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 ABCG8Q9H221 673 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 DMAC2Q9NW81 257 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 SSNA1O43805 119 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 ULK1O75385 1050 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 FARP2O94887 1054 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 PABPC4LP0CB38 370 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 ECHS1P30084 290 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 OR1E1P30953 314 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 CRATP43155 626 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 ACSM2AQ08AH3 577 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 LSAMPQ13449 338 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 CDH18Q13634 790 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 ACSM2BQ68CK6 577 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 CDCA2Q69YH5 1023 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 RBM12BQ8IXT5 1001 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 PHTF2Q8N3S3 785 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 NKAPQ8N5F7 415 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 PNPT1Q8TCS8 783 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 PPP3R2Q96LZ3 170 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 CHCHD6Q9BRQ6 235 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 GNPTGQ9UJJ9 305 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 LSM7Q9UK45 103 aaKnown RBP12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC9A8Q9Y2E8 581 aa12.43□□□□□ -0.42
CSPG4P13-202ENST00000567704 METTL18O95568 372 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 PABPC1P11940 636 aaKnown RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 GSTM5P46439 218 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 ALDH9A1P49189 494 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 RHOAP61586 193 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 LGALS3BPQ08380 585 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 ZNF829Q3KNS6 432 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 TMEM110Q86TL2 294 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 XYLT1Q86Y38 959 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 CENPSQ8N2Z9 138 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 HDAC10Q969S8 669 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 CSPG4P5Q96PW8 444 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 OR52B2Q96RD2 323 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 HIPK3Q9H422 1215 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 CXorf49A8MYA2 514 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 AIREO43918 545 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 KLHL18O94889 574 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 PIRTP0C851 137 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 UNGP13051 313 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 AOC1P19801 751 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 IGFBP5P24593 272 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 RFX3P48380 749 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 IST1P53990 364 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 EMID1Q96A84 441 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 RBM4BQ9BQ04 359 aaKnown RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 RBM4Q9BWF3 364 aaKnown RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 TOR3AQ9H497 397 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 ABCB9Q9NP78 766 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 MYOZ2Q9NPC6 264 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 SSR3Q9UNL2 185 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 TIMM22Q9Y584 194 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 UBIAD1Q9Y5Z9 338 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 TNS2Q63HR2 1409 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 A0A1B0GVG6 124 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 DNAJA2O60884 412 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 RHOCP08134 193 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC26A2P50443 739 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 PHC1P78364 1004 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 GAD2Q05329 585 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 MOGSQ13724 837 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 PTPRNQ16849 979 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 GLB1LQ6UWU2 654 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 OR52E6Q96RD3 313 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 C1orf21Q9H246 121 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC17A6Q9P2U8 582 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 ZNHIT2Q9UHR6 403 aa12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 CNOT6Q9ULM6 557 aaKnown RBP12.42□□□□□ -0.42
CSPG4P13-202ENST00000567704 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
CSPG4P13-202ENST00000567704 PRKAR1AP10644 381 aa12.41□□□□□ -0.42
CSPG4P13-202ENST00000567704 GNAZP19086 355 aa12.41□□□□□ -0.42
CSPG4P13-202ENST00000567704 FBXW4P57775 412 aa12.41□□□□□ -0.42
CSPG4P13-202ENST00000567704 CAPSQ13938 189 aa12.41□□□□□ -0.42
CSPG4P13-202ENST00000567704 SAMD7Q7Z3H4 446 aa12.41□□□□□ -0.42
CSPG4P13-202ENST00000567704 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms