RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 HEXDCQ8WVB3 486 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 OVCA2Q8WZ82 227 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 TRIM43Q96BQ3 446 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 POMKQ9H5K3 350 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 SLC2A6Q9UGQ3 507 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 ADAMTS6Q9UKP5 1117 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 AIM2O14862 343 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 KIAA0355O15063 1070 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 PSMD8P48556 350 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 KPNA1P52294 538 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 SEPT6Q14141 434 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 SPOUT1Q5T280 376 aaKnown RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 TPGS2Q68CL5 300 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 TRIM67Q6ZTA4 783 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 CHSY3Q70JA7 882 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 CMTR2Q8IYT2 770 aaKnown RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 PELI3Q8N2H9 469 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 PQLC1Q8N2U9 271 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 TEX26Q8N6G2 289 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 TXNDC5Q8NBS9 432 aaKnown RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 ZNF461Q8TAF7 563 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 TMEM169Q96HH4 297 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 CDK5RAP1Q96SZ6 601 aaKnown RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 TSC22D3Q99576 134 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 YIPF3Q9GZM5 350 aa17.8■□□□□ 0.44
CMTM3-214ENST00000567572 MRPL42Q9Y6G3 142 aaKnown RBP17.8■□□□□ 0.44
CMTM3-214ENST00000567572 CCDC78A2IDD5 438 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 SDHDO14521 159 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 ZMPSTE24O75844 475 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 IPO13O94829 963 aaKnown RBP17.79■□□□□ 0.44
CMTM3-214ENST00000567572 INHBCP55103 352 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 TRIP10Q15642 601 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 ZNF423Q2M1K9 1284 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 FBXL22Q6P050 247 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 FAM117BQ6P1L5 589 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 CCNYL1Q8N7R7 359 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 PDZD8Q8NEN9 1154 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 SHKBP1Q8TBC3 707 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 TADA1Q96BN2 335 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 MFSD1Q9H3U5 465 aa17.79■□□□□ 0.44
CMTM3-214ENST00000567572 COPG1Q9Y678 874 aaKnown RBP17.79■□□□□ 0.44
CMTM3-214ENST00000567572 EIF4E1BA6NMX2 242 aaKnown RBP17.78■□□□□ 0.44
CMTM3-214ENST00000567572 DRGXA6NNA5 263 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 EFCAB14O75071 495 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 CNTN5O94779 1100 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 HMBSP08397 361 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 HMGA1P17096 107 aaKnown RBP17.78■□□□□ 0.44
CMTM3-214ENST00000567572 LAG3P18627 525 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 ART3Q13508 389 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 PEX6Q13608 980 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 FLOT2Q14254 428 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 ALFQ53S48 1182 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 RARS2Q5T160 578 aaKnown RBP17.78■□□□□ 0.44
CMTM3-214ENST00000567572 MARC1Q5VT66 337 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 RAP1GAP2Q684P5 730 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 NXNQ6DKJ4 435 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 ST13P4Q8IZP2 240 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-214ENST00000567572 IGSF8Q969P0 613 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 RCN3Q96D15 328 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 UBXN10Q96LJ8 280 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 CATSPER2Q96P56 530 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 EBF3Q9H4W6 596 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 WDR41Q9HAD4 459 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 MEAF6Q9HAF1 191 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 MROH6A6NGR9 719 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 AP1G1O43747 822 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 ME2P23368 584 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 PEX2P28328 305 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 NFKB2Q00653 900 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 STX5Q13190 355 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 GRM2Q14416 872 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 SQLEQ14534 574 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 ZNF460Q14592 562 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 PDCD2Q16342 344 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-214ENST00000567572 NADSYN1Q6IA69 706 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 TFAP2DQ7Z6R9 452 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 CILP2Q8IUL8 1156 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 ICA1LQ8NDH6 482 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 MYRFLQ96LU7 910 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 GBP5Q96PP8 586 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 Q9H521 79 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 DNMT3LQ9UJW3 386 aa17.78■□□□□ 0.44
CMTM3-214ENST00000567572 ZNF840PA6NDX5 716 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 SMIM24O75264 130 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 BCAS2O75934 225 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-214ENST00000567572 WISP3O95389 354 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-214ENST00000567572 CHRNA4P43681 627 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 THOP1P52888 689 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 SULT2A1Q06520 285 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 PARP15Q460N3 678 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 SFT2D3Q587I9 215 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 PPM1LQ5SGD2 360 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 KLHDC10Q6PID8 442 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 DDX53Q86TM3 631 aaKnown RBP17.77■□□□□ 0.44
CMTM3-214ENST00000567572 ASB2Q96Q27 587 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 CDRT15Q96T59 188 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 SP110Q9HB58 689 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 POPDC3Q9HBV1 291 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 RIMKLBQ9ULI2 386 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms