RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 PRAMEP78395 509 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 CCDC149Q6ZUS6 474 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 CILP2Q8IUL8 1156 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 PIP4K2CQ8TBX8 421 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 ADAMTS19Q8TE59 1207 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 HERVK_113Q902F9 699 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 CLP1Q92989 425 aaKnown RBP23.35■■□□□ 1.33
LINC00543-201ENST00000567234 MIPEPQ99797 713 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 TASP1Q9H6P5 420 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 PIDD1Q9HB75 910 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 SMPD4Q9NXE4 827 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 ANKRD36A6QL64 1941 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 E2F8A0AVK6 867 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 PHGDHO43175 533 aaKnown RBP23.34■■□□□ 1.33
LINC00543-201ENST00000567234 ITM2AO43736 263 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 TRIM13O60858 407 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 CBX6O95503 412 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 C1RP00736 705 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 LINC00271P0C7V0 271 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 GLDCP23378 1020 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 KPNA2P52292 529 aaKnown RBP23.34■■□□□ 1.33
LINC00543-201ENST00000567234 SLC12A2P55011 1212 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 POLE2P56282 527 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 XIAPP98170 497 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 ITGA9Q13797 1035 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 CYTH1Q15438 398 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 LILRA6Q6PI73 481 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 ZYG11AQ6WRX3 759 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 MFSD6LQ8IWD5 586 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 TNS4Q8IZW8 715 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 ARL14EPQ8N8R7 260 aaPredicted RBP23.34■■□□□ 1.33
LINC00543-201ENST00000567234 MIPOL1Q8TD10 442 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 STYXQ8WUJ0 223 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 MRPS31Q92665 395 aaKnown RBP23.34■■□□□ 1.33
LINC00543-201ENST00000567234 HDAC10Q969S8 669 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 MCUR1Q96AQ8 359 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 ELMO2Q96JJ3 720 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 SLC22A12Q96S37 553 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 CYP2S1Q96SQ9 504 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 MUC3BQ9H195 1237 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 EPB41L1Q9H4G0 881 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 GPAMQ9HCL2 828 aa23.34■■□□□ 1.33
LINC00543-201ENST00000567234 RANBP2P49792 3224 aaKnown RBP23.34■■□□□ 1.33
LINC00543-201ENST00000567234 H0Y3Z8 333 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 GYG2O15488 501 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 GJB3O75712 270 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 PFKLP17858 780 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 INO80DQ53TQ3 878 aaPredicted RBP23.33■■□□□ 1.33
LINC00543-201ENST00000567234 CENPLQ8N0S6 344 aaPredicted RBP23.33■■□□□ 1.33
LINC00543-201ENST00000567234 TMEM151AQ8N4L1 468 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 GPR150Q8NGU9 434 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 UCMAQ8WVF2 138 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 TSPAN17Q96FV3 270 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 SORT1Q99523 831 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 LBHD1Q9BQE6 289 aaPredicted RBP23.33■■□□□ 1.33
LINC00543-201ENST00000567234 ZBED2Q9BTP6 218 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 SCUBE2Q9NQ36 999 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 OXSMQ9NWU1 459 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 IRAK4Q9NWZ3 460 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 CIDEBQ9UHD4 219 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 RUVBL2Q9Y230 463 aaKnown RBP23.33■■□□□ 1.33
LINC00543-201ENST00000567234 ZNF510Q9Y2H8 683 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 GMEB1Q9Y692 573 aa23.33■■□□□ 1.33
LINC00543-201ENST00000567234 LCHNA4D1U4 455 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 CBX4O00257 560 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 TBL1XO60907 577 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 KLHL2O95198 593 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 SAT1P21673 171 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 GSTT1P30711 240 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 AQP5P55064 265 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 TAS2R39P59534 338 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 HSF5Q4G112 596 aaPredicted RBP23.33■■□□□ 1.32
LINC00543-201ENST00000567234 ACSBG2Q5FVE4 666 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 TXNDC8Q6A555 127 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 CNSTQ6PJW8 725 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 NET1Q7Z628 596 aaPredicted RBP23.33■■□□□ 1.32
LINC00543-201ENST00000567234 CEP97Q8IW35 865 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 OR6P1Q8NGX9 317 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 TMA16Q96EY4 203 aaKnown RBP23.33■■□□□ 1.32
LINC00543-201ENST00000567234 OMDQ99983 421 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 FBXO6Q9NRD1 293 aaPredicted RBP23.33■■□□□ 1.32
LINC00543-201ENST00000567234 LSM7Q9UK45 103 aaKnown RBP23.33■■□□□ 1.32
LINC00543-201ENST00000567234 DNAJC16Q9Y2G8 782 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 ACTL7AQ9Y615 435 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 CPQQ9Y646 472 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 NUMBLQ9Y6R0 609 aa23.33■■□□□ 1.32
LINC00543-201ENST00000567234 MTCL1Q9Y4B5 1905 aaKnown RBP23.32■■□□□ 1.32
LINC00543-201ENST00000567234 H0Y626 953 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 RPP40O75818 363 aaKnown RBP23.32■■□□□ 1.32
LINC00543-201ENST00000567234 CRTAMO95727 393 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 LRG1P02750 347 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 ADH1AP07327 375 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 PSMA3P25788 255 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 GABRR2P28476 465 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 SCNN1BP51168 640 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 ARSDP51689 593 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 SLC7A9P82251 487 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 ARF5P84085 180 aa23.32■■□□□ 1.32
LINC00543-201ENST00000567234 TRMT5Q32P41 509 aaKnown RBP23.32■■□□□ 1.32
LINC00543-201ENST00000567234 C9orf50Q5SZB4 431 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms