RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
UBFD1-207ENST00000567212 SLC47A1Q96FL8 570 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 CPB2Q96IY4 423 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 PLK2Q9NYY3 685 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 MLXQ9UH92 298 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 SSR3Q9UNL2 185 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 C2orf81A6NN90 581 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 PIRTP0C851 137 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 CPB1P15086 417 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.272e-12■■□□□ 12.2
UBFD1-207ENST00000567212 GPC1P35052 558 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 NR4A2P43354 598 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 CDC42P60953 191 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 VBP1P61758 197 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 ZNF460Q14592 562 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 ATAD3BQ5T9A4 648 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 CLYBLQ8N0X4 340 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 DPP10Q8N608 796 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 HOPXQ9BPY8 73 aaPredicted RBP13.35□□□□□ -0.27
UBFD1-207ENST00000567212 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
UBFD1-207ENST00000567212 TTYH2Q9BSA4 534 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 GSDMCQ9BYG8 508 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 HOXC10Q9NYD6 342 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 TRPC4Q9UBN4 977 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 FBXO5Q9UKT4 447 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 PADI4Q9UM07 663 aa13.35□□□□□ -0.27
UBFD1-207ENST00000567212 BCLAF3A2AJT9 711 aaKnown RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 ZNF99A8MXY4 864 aaPredicted RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 H3BMM5 538 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 FDX1P10109 184 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 EMC10Q5UCC4 262 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 MED28Q9H204 178 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SSU72Q9NP77 194 aaKnown RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 KCNMB3Q9NPA1 279 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 TAS2R13Q9NYV9 303 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 LYVE1Q9Y5Y7 322 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CASKO14936 926 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SORBS2O94875 1100 aaKnown RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 DHFRP00374 187 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 C9P02748 559 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 PSKH1P11801 424 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 PIK3CGP48736 1102 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 MSS51Q4VC12 460 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 IER5Q5VY09 327 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 PHF13Q86YI8 300 aaPredicted RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 EPB41L4BQ9H329 900 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CCNB1IP1Q9NPC3 277 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CHRAC1Q9NRG0 131 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 PDP1Q9P0J1 537 aaPredicted RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SHPRHQ149N8 1683 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 NEMP2A6NFY4 417 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SLC22A3O75751 556 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 TCEA3O75764 348 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 T-ENOLP0DO92 83 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 NPR3P17342 541 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SLC7A1P30825 629 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CTSKP43235 329 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CENPAP49450 140 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 PTSQ03393 145 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 STX4Q12846 297 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 MTA1Q13330 715 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CYP1B1Q16678 543 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SYTL3Q4VX76 610 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 TMEM236Q5W0B7 351 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CNPPD1Q9BV87 410 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 IL22Q9GZX6 179 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 MUC3BQ9H195 1237 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SNTG1Q9NSN8 517 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 PAQR5Q9NXK6 330 aaPredicted RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 MEGF6O75095 1541 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CCDC162PA2VCL2 907 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CYP1A1P04798 512 aaPredicted RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 TKTL1P51854 596 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 IKBKEQ14164 716 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SPATA2LQ8IUW3 424 aaPredicted RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 OR52J3Q8NH60 311 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 CORO1BQ9BR76 489 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 EMILIN2Q9BXX0 1053 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 SIX2Q9NPC8 291 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 PTGFRNQ9P2B2 879 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 VPS4AQ9UN37 437 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 PCDHB12Q9Y5F1 795 aa13.34□□□□□ -0.27
UBFD1-207ENST00000567212 TIMM13Q9Y5L4 95 aaPredicted RBP13.34□□□□□ -0.27
UBFD1-207ENST00000567212 FAM92AA1XBS5 289 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 HNF4AP41235 474 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 ENPEPQ07075 957 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 SEMA3AQ14563 771 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 ANKRD52Q8NB46 1076 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 MKL1Q969V6 931 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 MSANTD3Q96H12 275 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 DCSTAMPQ9H295 470 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 C8orf4Q9NR00 106 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 A0A0G2JPF8 293 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 HNRNPCL3B7ZW38 293 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 LRCH4O75427 683 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 HNRNPCL4P0DMR1 293 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 PRKACBP22694 351 aa13.33□□□□□ -0.28
UBFD1-207ENST00000567212 CES1P23141 567 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms