RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ADARB1P78563 741 aaKnown RBP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 FAM83EQ2M2I3 478 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 CCNYL2Q5T2Q4 361 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 C9orf57Q5W0N0 161 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 ESRP1Q6NXG1 681 aaKnown RBP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 MOB2Q70IA6 237 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 PAPD5Q8NDF8 572 aaKnown RBP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 BEST2Q8NFU1 509 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 HDAC10Q969S8 669 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 LRCH3Q96II8 777 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 SLX1AQ9BQ83 275 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 TRMOQ9BU70 441 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 C1orf50Q9BV19 199 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 CYP4F12Q9HCS2 524 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 WDR6Q9NNW5 1121 aaKnown RBP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 CMTM6Q9NX76 183 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 ZNF639Q9UID6 485 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 WDR90Q96KV7 1748 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 UNCXA6NJT0 531 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 FXYD1O00168 92 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 DYNC1LI2O43237 492 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 XPOTO43592 962 aaKnown RBP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 NOL3O60936 208 aaKnown RBP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 CLIC3O95833 236 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 GFAPP14136 432 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 FUT4P22083 530 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 CDH3P22223 829 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 IGBP1P78318 339 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 LIMS2Q7Z4I7 341 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 SLC22A9Q8IVM8 553 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 SLC15A4Q8N697 577 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 PTCD2Q8WV60 388 aaKnown RBP15.73■□□□□ 0.11
COMMD4-215ENST00000566843 KCTD13Q8WZ19 329 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 CDCA5Q96FF9 252 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 TBL1YQ9BQ87 522 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 DUSP16Q9BY84 665 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 MUC13Q9H3R2 512 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 GID8Q9NWU2 228 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 PKD2L2Q9NZM6 624 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 AKT3Q9Y243 479 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 CORINQ9Y5Q5 1042 aa15.73■□□□□ 0.11
COMMD4-215ENST00000566843 A0A0J9YYE9 177 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 UBFD1O14562 309 aaKnown RBP15.72■□□□□ 0.11
COMMD4-215ENST00000566843 EI24O14681 340 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 SEC14L2O76054 403 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 RBP1P09455 135 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 CPB1P15086 417 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 MATN1P21941 496 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 OXTRP30559 389 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 RFC2P35250 354 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 ETFBP38117 255 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 TUBA3CQ13748 450 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 CSHL1Q14406 222 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 NR1D2Q14995 579 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 SLC14A2Q15849 920 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 DCAF4L1Q3SXM0 396 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 AGAP9Q5VTM2 703 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 DENND5AQ6IQ26 1287 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 ZNF773Q6PK81 442 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 OTOP3Q7RTS5 596 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
COMMD4-215ENST00000566843 COPS5Q92905 334 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 C18orf25Q96B23 403 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-215ENST00000566843 GPN2Q9H9Y4 310 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-215ENST00000566843 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 FBRSL1Q9HCM7 1045 aaKnown RBP15.72■□□□□ 0.11
COMMD4-215ENST00000566843 ERAP1Q9NZ08 941 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 FBXW11Q9UKB1 542 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 SHROOM3Q8TF72 1996 aa15.72■□□□□ 0.11
COMMD4-215ENST00000566843 TCRBV5S2A0A599 114 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 TMEM247A6NEH6 219 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 ARPC2O15144 300 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 VTNP04004 478 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 FYNP06241 537 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 ZNF182P17025 639 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 IMPDH1P20839 514 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 POLR2IP36954 125 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 RPS9P46781 194 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 SLC12A2P55011 1212 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 RPS3AP61247 264 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 ZNF33AQ06730 810 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 FOXM1Q08050 763 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 TRAF2Q12933 501 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 RGS21Q2M5E4 152 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 UGT3A2Q3SY77 523 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 ZNF280DQ6N043 979 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 HFE2Q6ZVN8 426 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 RPS27LQ71UM5 84 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 ZC3H7AQ8IWR0 971 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 DDIASQ8IXT1 998 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 OFCC1Q8IZS5 231 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 PPHLN1Q8NEY8 458 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 NANOGQ9H9S0 305 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 TREX1Q9NSU2 369 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 IFT80Q9P2H3 777 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 SEPT3Q9UH03 358 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 FBXO5Q9UKT4 447 aa15.71■□□□□ 0.11
COMMD4-215ENST00000566843 AAR2Q9Y312 384 aaKnown RBP15.71■□□□□ 0.11
COMMD4-215ENST00000566843 CFAP99D6REC4 459 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms