RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZBTB16Q05516 673 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PPATQ06203 517 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 LRRC74AQ0VAA2 488 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 DYRK1AQ13627 763 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 OASLQ15646 514 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ELAVL1Q15717 326 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 KCNT1Q5JUK3 1230 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PRR31Q5SQ13 230 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 TREML2Q5T2D2 321 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SFMBT2Q5VUG0 894 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 KRT79Q5XKE5 535 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM88Q6PEY1 159 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 GLB1LQ6UWU2 654 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 KYAT3Q6YP21 454 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 MEX3BQ6ZN04 569 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 MICALCLQ6ZW33 695 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 MAVSQ7Z434 540 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 LURAP1LQ8IV03 231 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ADGRF3Q8IZF5 1079 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CARFQ8N187 725 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 GUF1Q8N442 669 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ZNF808Q8N4W9 903 aaPredicted RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 AMER2Q8N7J2 671 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 RBM15BQ8NDT2 890 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 LPCAT1Q8NF37 534 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 OR52N2Q8NGI0 321 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CFAP61Q8NHU2 1237 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CEP76Q8TAP6 659 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 BICD2Q8TD16 824 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 HASPINQ8TF76 798 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PTPMT1Q8WUK0 201 aaPredicted RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 GLMPQ8WWB7 406 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SHC3Q92529 594 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 AKAP1Q92667 903 aaKnown RBP eCLIP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 NXNL1Q96CM4 212 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 FBXL20Q96IG2 436 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 YTHDC1Q96MU7 727 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SPATA13Q96N96 652 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 GAL3ST4Q96RP7 486 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 NPAS1Q99742 590 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SYT17Q9BSW7 474 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PDZD7Q9H5P4 517 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PAPOLBQ9NRJ5 636 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC22A11Q9NSA0 550 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ZBTB40Q9NUA8 1239 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ABHD10Q9NUJ1 306 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PAG1Q9NWQ8 432 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 NLKQ9UBE8 527 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CRNNQ9UBG3 495 aaPredicted RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 MGAT4CQ9UBM8 478 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 TRPC4Q9UBN4 977 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 HEY2Q9UBP5 337 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 TSPYL4Q9UJ04 414 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 LAMP5Q9UJQ1 280 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 FBXW11Q9UKB1 542 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 APPL1Q9UKG1 709 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 FBXO4Q9UKT5 387 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 HPCAL4Q9UM19 191 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 STX8Q9UNK0 236 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 B3GNT3Q9Y2A9 372 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 RPH3AQ9Y2J0 694 aaPredicted RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PKP3Q9Y446 797 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 NFS1Q9Y697 457 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 DUSP10Q9Y6W6 482 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SMARCA2P51531 1590 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A0B4J293 547 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A1B0GTL3 188 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TCRBV7S3A2A0A539 114 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 LNP1A1A4G5 178 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TARSL2A2RTX5 802 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 OR6C68A6NDL8 312 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ERICH4A6NGS2 130 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 NPIPB11E5RHQ5 1161 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 OGG1O15527 345 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ST8SIA3O43173 380 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 HCRTR2O43614 444 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ZC3H11AO75152 810 aaKnown RBP eCLIP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 PEX11AO75192 247 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 PMPCBO75439 489 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ONECUT2O95948 504 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 HEXAP06865 529 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ZFYP08048 801 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 RHOP08100 348 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 OR52Z1P0C646 297 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 PPP3CBP16298 524 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 EPORP19235 508 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 CCNA2P20248 432 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ITGAXP20702 1163 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 IL10P22301 178 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 ACHEP22303 614 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 TCEA1P23193 301 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 RPL13P26373 211 aaKnown RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 PBLDP30039 288 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 APOBEC3AP31941 199 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 GKP32189 559 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 STAT6P42226 847 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 PSMC4P43686 418 aa3.38□□□□□ -1.87
HERPUD1-211ENST00000566550 VPS41P49754 854 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms