RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ARL10Q8N8L6 244 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 OR1E3Q8WZA6 343 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 NUDCD1Q96RS6 583 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 RBM15Q96T37 977 aaKnown RBP eCLIP18.38■□□□□ 0.53
USB1-213ENST00000566292 MGME1Q9BQP7 344 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 NOD2Q9HC29 1040 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 FGF22Q9HCT0 170 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 IP6K2Q9UHH9 426 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 RABGEF1Q9UJ41 708 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 GPR34Q9UPC5 381 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 SATB2Q9UPW6 733 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 DGKBQ9Y6T7 804 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 PMS2P1A4D2B8 440 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 SOCS5O75159 536 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 TNFP01375 233 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 GYPCP04921 128 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 IL4RP24394 825 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 TRIM23P36406 574 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 PCBP4P57723 403 aaKnown RBP18.37■□□□□ 0.53
USB1-213ENST00000566292 MAXP61244 160 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 TRAF2Q12933 501 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 CNGA3Q16281 694 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 ALKBH5Q6P6C2 394 aaKnown RBP18.37■□□□□ 0.53
USB1-213ENST00000566292 GKN2Q86XP6 184 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 ATPAF2Q8N5M1 289 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 OR56A4Q8NGH8 313 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 ATL2Q8NHH9 583 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 PDCD6IPQ8WUM4 868 aaKnown RBP18.37■□□□□ 0.53
USB1-213ENST00000566292 SCG3Q8WXD2 468 aaKnown RBP18.37■□□□□ 0.53
USB1-213ENST00000566292 GRAMD1AQ96CP6 724 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 PRR11Q96HE9 360 aaPredicted RBP18.37■□□□□ 0.53
USB1-213ENST00000566292 NAF1Q96HR8 494 aaKnown RBP18.37■□□□□ 0.53
USB1-213ENST00000566292 COQ10AQ96MF6 247 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 LGR4Q9BXB1 951 aa18.37■□□□□ 0.53
USB1-213ENST00000566292 MRPL40Q9NQ50 206 aaKnown RBP18.37■□□□□ 0.53
USB1-213ENST00000566292 CACNB4O00305 520 aaPredicted RBP18.36■□□□□ 0.53
USB1-213ENST00000566292 NTN3O00634 580 aaPredicted RBP18.36■□□□□ 0.53
USB1-213ENST00000566292 HOXC4P09017 264 aaPredicted RBP18.36■□□□□ 0.53
USB1-213ENST00000566292 CD48P09326 243 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 CDH6P55285 790 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 ERVPABLB-1P60509 514 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 MMRN1Q13201 1228 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 ACOX1Q15067 660 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 NFKBIBQ15653 356 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 IGF2-ASQ6U949 168 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 CPNE8Q86YQ8 564 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 MGAQ8IWI9 3026 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 ZNF248Q8NDW4 579 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 WDR48Q8TAF3 677 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 FAM71BQ8TC56 605 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 CCDC74AQ96AQ1 378 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 FCRL3Q96P31 734 aaPredicted RBP18.36■□□□□ 0.53
USB1-213ENST00000566292 LGMNQ99538 433 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 IFNKQ9P0W0 207 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 NENFQ9UMX5 172 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 SCN8AQ9UQD0 1980 aa18.36■□□□□ 0.53
USB1-213ENST00000566292 HEXIM1O94992 359 aaKnown RBP18.35■□□□□ 0.53
USB1-213ENST00000566292 CPP00450 1065 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 LHCGRP22888 699 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 VIPR1P32241 457 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 SERPINB6P35237 376 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 MMP13P45452 471 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 ARSEP51690 589 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 SPIDRQ14159 915 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 PTPRRQ15256 657 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 ATP13A4Q4VNC1 1196 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 CCDC122Q5T0U0 273 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 MARC1Q5VT66 337 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 PNCKQ6P2M8 343 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 SFTPA2Q8IWL1 248 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 CBARPQ8N350 705 aaPredicted RBP18.35■□□□□ 0.53
USB1-213ENST00000566292 GPR156Q8NFN8 814 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 IQCDQ96DY2 449 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 SLC46A1Q96NT5 459 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 UBL7Q96S82 380 aaPredicted RBP18.35■□□□□ 0.53
USB1-213ENST00000566292 TMEM168Q9H0V1 697 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 WDR26Q9H7D7 661 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 SYNDIG1Q9H7V2 258 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 RCOR3Q9P2K3 495 aaPredicted RBP18.35■□□□□ 0.53
USB1-213ENST00000566292 PHTF1Q9UMS5 762 aa18.35■□□□□ 0.53
USB1-213ENST00000566292 LUC7L2Q9Y383 392 aaKnown RBP18.35■□□□□ 0.53
USB1-213ENST00000566292 A0A1W2PQ67 120 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 GOLGA6L19H0YKK7 550 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 MYO1FO00160 1098 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 TNFRSF10CO14798 259 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 MFSD11O43934 449 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 KELP23276 732 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 KRT81Q14533 505 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 RALGPS1Q5JS13 557 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 HSD11B1LQ7Z5J1 315 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 TAF8Q7Z7C8 310 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 BBS5Q8N3I7 341 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 TEX26Q8N6G2 289 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 CCL4L1Q8NHW4 92 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 ZNF564Q8TBZ8 553 aaPredicted RBP18.34■□□□□ 0.53
USB1-213ENST00000566292 NUS1Q96E22 293 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 CYP4F12Q9HCS2 524 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 NT5MQ9NPB1 228 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 THSD1Q9NS62 852 aa18.34■□□□□ 0.53
USB1-213ENST00000566292 PCDHGA8Q9Y5G5 932 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms