RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 HIPK3Q9H422 1215 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 SLC32A1Q9H598 525 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 UBE2ZQ9H832 354 aaPredicted RBP4.42□□□□□ -1.7
LINC00561-201ENST00000565815 SWAP70Q9UH65 585 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 PACSIN3Q9UKS6 424 aa4.42□□□□□ -1.7
LINC00561-201ENST00000565815 PEX12O00623 359 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 TBX18O95935 607 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 CSF2RAP15509 400 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ABCD3P28288 659 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 CFHR3Q02985 330 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 HERC4Q5GLZ8 1057 aaPredicted RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 FAM173BQ6P4H8 233 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 SERPINA13PQ6UXR4 307 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 RANBP10Q6VN20 620 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 MAATS1Q7Z4T9 603 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 VSTM4Q8IW00 320 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ADHFE1Q8IWW8 467 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 MLKLQ8NB16 471 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 NCOA7Q8NI08 942 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 NSUN4Q96CB9 384 aaKnown RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 CCDC51Q96ER9 411 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 RNFT2Q96EX2 444 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 FAR2Q96K12 515 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 FRMD8Q9BZ67 464 aaPredicted RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 XPO4Q9C0E2 1151 aaKnown RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 RPAP3Q9H6T3 665 aaPredicted RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 NDUFAF4Q9P032 175 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 KLHL13Q9P2N7 655 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ORC3Q9UBD5 711 aaPredicted RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 SYNRGQ9UMZ2 1314 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 A0A087X1B8 175 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 TCRBV7S3A2A0A539 114 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ASB14A6NK59 587 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 TULP2O00295 520 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 CPLX1O14810 134 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 GCATO75600 419 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 TJP3O95049 919 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 MBD4O95243 580 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 BMP15O95972 392 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 PNMA6AP0CW24 399 aaPredicted RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 HSPD1P10809 573 aaKnown RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 TOP1P11387 765 aaKnown RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 MCM3P25205 808 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 TYK2P29597 1187 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 SLC8A1P32418 973 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 SYKP43405 635 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 TFCP2Q12800 502 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 PPP2R5BQ15173 497 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 CERKLQ49MI3 558 aaPredicted RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 PRAMEF17Q5VTA0 474 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ARMCX5Q6P1M9 558 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ANKRD16Q6P6B7 361 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 CTR9Q6PD62 1173 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ANKS1BQ7Z6G8 1248 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 IQUBQ8NA54 791 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 PNLDC1Q8NA58 520 aaKnown RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 OR52L2PQ8NGH6 319 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 KAT2AQ92830 837 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 EXOC4Q96A65 974 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ZUFSPQ96AP4 578 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ELP4Q96EB1 424 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 GATA5Q9BWX5 397 aaPredicted RBP4.41□□□□□ -1.7
LINC00561-201ENST00000565815 RAI14Q9P0K7 980 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 IFNKQ9P0W0 207 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ARHGAP26Q9UNA1 814 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 ENTPD2Q9Y5L3 495 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 DMRT1Q9Y5R6 373 aa4.41□□□□□ -1.7
LINC00561-201ENST00000565815 LAMA4Q16363 1823 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 FOCADQ5VW36 1801 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 A0A1B0GVC2 190 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 SLC22A23A1A5C7 686 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 CCDC151A5D8V7 595 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 ATP2A1O14983 1001 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 HOXC11O43248 304 aaPredicted RBP4.4□□□□□ -1.7
LINC00561-201ENST00000565815 ERLIN1O75477 346 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 CNTN5O94779 1100 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 IVLP07476 585 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 AVPR1BP47901 424 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 NDUFA8P51970 172 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 OAZ1P54368 228 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 UBASH3AP57075 661 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 TRDNQ13061 729 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 RESP18Q5W5W9 173 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 STOX1Q6ZVD7 989 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 TMEM179Q6ZVK1 233 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 ATG9AQ7Z3C6 839 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 RFX6Q8HWS3 928 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 RHPN2Q8IUC4 686 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 CEP112Q8N8E3 955 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 HVCN1Q96D96 273 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 MPP4Q96JB8 637 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 PANX2Q96RD6 677 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 TGS1Q96RS0 853 aaKnown RBP4.4□□□□□ -1.7
LINC00561-201ENST00000565815 CTAGE1Q96RT6 745 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 HEMGNQ9BXL5 484 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 CUL9Q8IWT3 2517 aa4.4□□□□□ -1.7
LINC00561-201ENST00000565815 NEDD4P46934 1319 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 USP27XA6NNY8 438 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 PRSS47A8MTI9 375 aa4.4□□□□□ -1.71
LINC00561-201ENST00000565815 J3KRW8 73 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms