RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 GLB1P16278 677 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 CR2P20023 1033 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 SLC5A2P31639 672 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 SCNN1BP51168 640 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 INHBCP55103 352 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 KIAA1024LP59773 190 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 POLR2LP62875 67 aaKnown RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 BCL2L1Q07817 233 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 SLC10A7Q0GE19 358 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 EIF3IQ13347 325 aaKnown RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 LY6DQ14210 128 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 HLTFQ14527 1009 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 TAF1BQ53T94 588 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 CERCAMQ5T4B2 595 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 CFAP58Q5T655 872 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 PNCKQ6P2M8 343 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 DPPA4Q7L190 304 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 RAB11FIP2Q7L804 512 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 ZNF571Q7Z3V5 609 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 TMPRSS9Q7Z410 1059 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 TAF8Q7Z7C8 310 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 PSTKQ8IV42 348 aaKnown RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 PGBD5Q8N414 524 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 FBXO39Q8N4B4 442 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 FAM46DQ8NEK8 389 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 OR56A4Q8NGH8 313 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 ATL2Q8NHH9 583 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 CCL4L1Q8NHW4 92 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 COQ10AQ96MF6 247 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 GFM1Q96RP9 751 aaKnown RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 CINPQ9BW66 212 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 HAUS4Q9H6D7 363 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 ETNK2Q9NVF9 386 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 AIPL1Q9NZN9 384 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 ACSL6Q9UKU0 697 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 ATXN7L1Q9ULK2 861 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-213ENST00000565173 ST14Q9Y5Y6 855 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 RNF215Q9Y6U7 377 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 COL12A1Q99715 3063 aa8.61□□□□□ -1.03
CAPN3-213ENST00000565173 ANKRD36A6QL64 1941 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 CAPN8A6NHC0 703 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 LRRC53A6NM62 1247 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 TMX2-CTNND1H3BSU7 103 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 DFFAO00273 331 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 CACNB4O00305 520 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 DAPK3O43293 454 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 B4GAT1O43505 415 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 PRPSAP2O60256 369 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 MAFKO60675 156 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 RNF8O76064 485 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 ELFN1P0C7U0 828 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 IL1R2P27930 398 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 PRKCIP41743 596 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 AP1S1P61966 158 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 B4GALNT1Q00973 533 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 SRSF6Q13247 344 aaKnown RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 LBRQ14739 615 aaKnown RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 PTPRRQ15256 657 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 TGIF1Q15583 401 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 CNGA3Q16281 694 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 DPYSL2Q16555 572 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 C14orf28Q4W4Y0 310 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 PPP6R3Q5H9R7 873 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 KIAA1614Q5VZ46 1190 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 PPP1R2P3Q6NXS1 205 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 CCDC81Q6ZN84 652 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 POLNQ7Z5Q5 900 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 SPRED1Q7Z699 444 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 C17orf82Q86X59 251 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 NRROSQ86YC3 692 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 CCNJLQ8IV13 435 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 LZTR1Q8N653 840 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 AOPEPQ8N6M6 819 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 Q8N9G6 341 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 GPBAR1Q8TDU6 330 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 ZNF599Q96NL3 588 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 GBP4Q96PP9 640 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 CCNL2Q96S94 520 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 TEX101Q9BY14 249 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 STRADBQ9C0K7 418 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 ISCUQ9H1K1 167 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 SYNDIG1Q9H7V2 258 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 SP110Q9HB58 689 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 EPB41L5Q9HCM4 733 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 SPATS2LQ9NUQ6 558 aaKnown RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 LRIT1Q9P2V4 623 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 B4GALT6Q9UBX8 382 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 CNOT8Q9UFF9 292 aaKnown RBP8.6□□□□□ -1.03
CAPN3-213ENST00000565173 SEPT3Q9UH03 358 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 PCDHGC4Q9Y5F7 938 aa8.6□□□□□ -1.03
CAPN3-213ENST00000565173 SCN8AQ9UQD0 1980 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 COL6A6A6NMZ7 2263 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-213ENST00000565173 PRSS38A1L453 326 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 B4DGG1 531 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 B8ZZF3 427 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 NVLO15381 856 aaKnown RBP8.59□□□□□ -1.03
CAPN3-213ENST00000565173 NUDT21O43809 227 aaKnown RBP8.59□□□□□ -1.03
CAPN3-213ENST00000565173 SOCS5O75159 536 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 HEXIM1O94992 359 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms