RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 C1QL1O75973 258 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 SERPINA4P29622 427 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 UCNP55089 124 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 SLC25A11Q02978 314 aaKnown RBP18.58■□□□□ 0.56
CLN6-204ENST00000564752 IL10RBQ08334 325 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 MTM1Q13496 603 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 KRT81Q14533 505 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 RFTN1Q14699 578 aaPredicted RBP18.58■□□□□ 0.56
CLN6-204ENST00000564752 HADHQ16836 314 aaKnown RBP18.58■□□□□ 0.56
CLN6-204ENST00000564752 TXNRD3NBQ6F5E7 133 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 ARHGAP36Q6ZRI8 547 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 NYAP1Q6ZVC0 841 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 RD3Q7Z3Z2 195 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 POLNQ7Z5Q5 900 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 ATL2Q8NHH9 583 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 PCDH19Q8TAB3 1148 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 ECHDC3Q96DC8 303 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 CSPG4P5Q96PW8 444 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 ABHD10Q9NUJ1 306 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 CTTNBP2NLQ9P2B4 639 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 KLQ9UEF7 1012 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 SSUH2Q9Y2M2 353 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 RP1P56715 2156 aa18.58■□□□□ 0.56
CLN6-204ENST00000564752 SSU72P8A0A1W2PR75 194 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 MFAP3LO75121 409 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 PCCBP05166 539 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 H2AFZP0C0S5 128 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 AMPD1P23109 780 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 PDX1P52945 283 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 TMPRSS3P57727 454 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 POLR2LP62875 67 aaKnown RBP18.57■□□□□ 0.56
CLN6-204ENST00000564752 SKOR1P84550 965 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 BCL2L1Q07817 233 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 SPIDRQ14159 915 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 PCSK4Q6UW60 755 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 H2AFVQ71UI9 128 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 GKN2Q86XP6 184 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 KYQ8NBH2 561 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 PLA2G15Q8NCC3 412 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 WDR36Q8NI36 951 aaKnown RBP18.57■□□□□ 0.56
CLN6-204ENST00000564752 WDR92Q96MX6 357 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 PCDH18Q9HCL0 1135 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 SIRPGQ9P1W8 387 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 UVRAGQ9P2Y5 699 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 RABGEF1Q9UJ41 708 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 GPR34Q9UPC5 381 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 DGKBQ9Y6T7 804 aa18.57■□□□□ 0.56
CLN6-204ENST00000564752 HELZ2Q9BYK8 2649 aaKnown RBP18.57■□□□□ 0.56
CLN6-204ENST00000564752 ATMQ13315 3056 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 PMS2P1A4D2B8 440 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 CDRT15L2A8MXV6 281 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 TRAFD1O14545 582 aaPredicted RBP18.56■□□□□ 0.56
CLN6-204ENST00000564752 KLK10O43240 276 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 AKR1B10O60218 316 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 RECQL5O94762 991 aaPredicted RBP18.56■□□□□ 0.56
CLN6-204ENST00000564752 TNFP01375 233 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 SERPINB6P35237 376 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 GJC1P36383 396 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 CDH6P55285 790 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 RALGDSQ12967 914 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 TCEA2Q15560 299 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 TMCO4Q5TGY1 634 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 KCTD16Q68DU8 428 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 LIPIQ6XZB0 460 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 TP53INP2Q8IXH6 220 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 CCDC74AQ96AQ1 378 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 NSMCE3Q96MG7 304 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 RBM15Q96T37 977 aaKnown RBP eCLIP18.56■□□□□ 0.56
CLN6-204ENST00000564752 PACSIN1Q9BY11 444 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 CPNE5Q9HCH3 593 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 ETNK2Q9NVF9 386 aa18.56■□□□□ 0.56
CLN6-204ENST00000564752 CFAP46Q8IYW2 2715 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 COL27A1Q8IZC6 1860 aaPredicted RBP18.55■□□□□ 0.56
CLN6-204ENST00000564752 CCDC187A0A096LP49 1063 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 HOXC4P09017 264 aaPredicted RBP18.55■□□□□ 0.56
CLN6-204ENST00000564752 GM2AP17900 193 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 TRIM23P36406 574 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 MLLT3P42568 568 aaPredicted RBP18.55■□□□□ 0.56
CLN6-204ENST00000564752 SCNN1BP51168 640 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 RENBPP51606 427 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 KIAA1024LP59773 190 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 ASTE1Q2TB18 679 aaPredicted RBP18.55■□□□□ 0.56
CLN6-204ENST00000564752 ARHGAP40Q5TG30 622 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 FOXR1Q6PIV2 292 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 DPPA4Q7L190 304 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 ARL14Q8N4G2 192 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 ATPAF2Q8N5M1 289 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 PAF1Q8N7H5 531 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 OR6C4Q8NGE1 309 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 FUBP1Q96AE4 644 aaKnown RBP18.55■□□□□ 0.56
CLN6-204ENST00000564752 ZNF599Q96NL3 588 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 PSKH2Q96QS6 385 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 RCOR3Q9P2K3 495 aaPredicted RBP18.55■□□□□ 0.56
CLN6-204ENST00000564752 SEPT3Q9UH03 358 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 LCMT1Q9UIC8 334 aa18.55■□□□□ 0.56
CLN6-204ENST00000564752 TMEM202A6NGA9 273 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 ERVH48-1M5A8F1 160 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 CACNB4O00305 520 aaPredicted RBP18.54■□□□□ 0.56
CLN6-204ENST00000564752 PROSCO94903 275 aa18.54■□□□□ 0.56
CLN6-204ENST00000564752 TNFSF15O95150 251 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms