RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZSCAN1Q8NBB4 408 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 TSEN2Q8NCE0 465 aaKnown RBP14.15□□□□□ -0.14
CDR2-204ENST00000564542 ENOX1Q8TC92 643 aaKnown RBP14.15□□□□□ -0.14
CDR2-204ENST00000564542 KIAA1524Q8TCG1 905 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 CELF6Q96J87 481 aaKnown RBP14.15□□□□□ -0.14
CDR2-204ENST00000564542 B3GNT4Q9C0J1 378 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 NUP62CLQ9H1M0 184 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 DPEP2Q9H4A9 486 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 WDR26Q9H7D7 661 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 SEPT11Q9NVA2 429 aaKnown RBP14.15□□□□□ -0.14
CDR2-204ENST00000564542 FOXJ2Q9P0K8 574 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 SIK3Q9Y2K2 1263 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 PCDHB11Q9Y5F2 797 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 TLN1Q9Y490 2541 aaKnown RBP14.15□□□□□ -0.14
CDR2-204ENST00000564542 UNC13CQ8NB66 2214 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 PRSS38A1L453 326 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 ARHGAP42A6NI28 874 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 EIF3CLB5ME19 914 aaKnown RBP14.14□□□□□ -0.15
CDR2-204ENST00000564542 C9orf172C9J069 976 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.14□□□□□ -0.15
CDR2-204ENST00000564542 TERTO14746 1132 aaKnown RBP14.14□□□□□ -0.15
CDR2-204ENST00000564542 PALMO75781 387 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 CPNE6O95741 557 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 FAM87AP0C7U9 286 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 GM2AP17900 193 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 ITGB6P18564 788 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 PAPOLAP51003 745 aaKnown RBP14.14□□□□□ -0.15
CDR2-204ENST00000564542 MAPK10P53779 464 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 POLR2LP62875 67 aaKnown RBP14.14□□□□□ -0.15
CDR2-204ENST00000564542 PHF19Q5T6S3 580 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 ZNF438Q7Z4V0 828 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 ZFAND4Q86XD8 727 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 DTX1Q86Y01 620 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 CCL4L1Q8NHW4 92 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 USP7Q93009 1102 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 EIF3CQ99613 913 aaKnown RBP14.14□□□□□ -0.15
CDR2-204ENST00000564542 SEMA3CQ99985 751 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 CINPQ9BW66 212 aaPredicted RBP14.14□□□□□ -0.15
CDR2-204ENST00000564542 LGR4Q9BXB1 951 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 TRIM4Q9C037 500 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 SLC39A8Q9C0K1 460 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 CYP4F12Q9HCS2 524 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 IL17BQ9UHF5 180 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 AP4E1Q9UPM8 1137 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 SPTA1P02549 2419 aa14.14□□□□□ -0.15
CDR2-204ENST00000564542 CYSRT1A8MQ03 144 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 AGRPO00253 132 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 PDE2AO00408 941 aaPredicted RBP14.13□□□□□ -0.15
CDR2-204ENST00000564542 MYCLP1P12525 358 aaPredicted RBP14.13□□□□□ -0.15
CDR2-204ENST00000564542 B4GALNT1Q00973 533 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 BCL2L1Q07817 233 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 NSUN2Q08J23 767 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDR2-204ENST00000564542 RFTN1Q14699 578 aaPredicted RBP14.13□□□□□ -0.15
CDR2-204ENST00000564542 C16orf72Q14CZ0 275 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 CLPPQ16740 277 aaPredicted RBP14.13□□□□□ -0.15
CDR2-204ENST00000564542 TMEM164Q5U3C3 297 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 PNCKQ6P2M8 343 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 DCUN1D2Q6PH85 259 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 ATG14Q6ZNE5 492 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 SEMA6CQ9H3T2 930 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 SP110Q9HB58 689 aa14.13□□□□□ -0.15
CDR2-204ENST00000564542 AKAP7Q9P0M2 348 aaPredicted RBP14.13□□□□□ -0.15
CDR2-204ENST00000564542 NAV2Q8IVL1 2488 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 EEF2KO00418 725 aaKnown RBP14.12□□□□□ -0.15
CDR2-204ENST00000564542 TRAFD1O14545 582 aaPredicted RBP14.12□□□□□ -0.15
CDR2-204ENST00000564542 HGSO14964 777 aaPredicted RBP14.12□□□□□ -0.15
CDR2-204ENST00000564542 CCNB1P14635 433 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 WT1P19544 449 aaPredicted RBP14.12□□□□□ -0.15
CDR2-204ENST00000564542 AP1S1P61966 158 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 OGDHQ02218 1023 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 NR1D2Q14995 579 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 ACOX1Q15067 660 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 TBR1Q16650 682 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 PIM3Q86V86 326 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 C17orf82Q86X59 251 aaPredicted RBP14.12□□□□□ -0.15
CDR2-204ENST00000564542 ARHGAP12Q8IWW6 846 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 PELI3Q8N2H9 469 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 PAF1Q8N7H5 531 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 NEK11Q8NG66 645 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 GPBAR1Q8TDU6 330 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 SPOCK2Q92563 424 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 NUS1Q96E22 293 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 AGPAT1Q99943 283 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 DHX35Q9H5Z1 703 aaKnown RBP14.12□□□□□ -0.15
CDR2-204ENST00000564542 CARS2Q9HA77 564 aaKnown RBP14.12□□□□□ -0.15
CDR2-204ENST00000564542 RDH14Q9HBH5 336 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 GPATCH2LQ9NWQ4 482 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 MOSPD1Q9UJG1 213 aa14.12□□□□□ -0.15
CDR2-204ENST00000564542 STMND1H3BQB6 276 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 TEX33O43247 280 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 ZW10O43264 779 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 SUV39H1O43463 412 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 B4GAT1O43505 415 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 SCNN1BP51168 640 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 MAZP56270 477 aaKnown RBP14.11□□□□□ -0.15
CDR2-204ENST00000564542 NFKB2Q00653 900 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 IL10RBQ08334 325 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 ILF3Q12906 894 aaKnown RBP eCLIP14.11□□□□□ -0.151e-6■□□□□ 8.4
CDR2-204ENST00000564542 CA9Q16790 459 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 AMZ1Q400G9 498 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms