RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 SLC44A1Q8WWI5 657 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 ALKBH8Q96BT7 664 aaKnown RBP9.82□□□□□ -0.84
UBFD1-203ENST00000564106 MGME1Q9BQP7 344 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 DHRS4Q9BTZ2 278 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 SPON2Q9BUD6 331 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 CAPS2Q9BXY5 557 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 MRM3Q9HC36 420 aaKnown RBP9.82□□□□□ -0.84
UBFD1-203ENST00000564106 SSU72Q9NP77 194 aaKnown RBP9.82□□□□□ -0.84
UBFD1-203ENST00000564106 SYBUQ9NX95 663 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 KIAA1522Q9P206 1035 aaPredicted RBP9.82□□□□□ -0.84
UBFD1-203ENST00000564106 TXNDC16Q9P2K2 825 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 VPS28Q9UK41 221 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 SOX13Q9UN79 622 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 RPS6KL1Q9Y6S9 549 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 IGF2RP11717 2491 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 NUMA1Q14980 2115 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 CKAP5Q14008 2032 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 ANKRD36A6QL64 1941 aa9.82□□□□□ -0.84
UBFD1-203ENST00000564106 A0A0D9SEW6 157 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 TCRBV21S2A2A0A5A6 115 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 HEATR9A2RTY3 570 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 FAM159BA6NKW6 160 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 SRRM3A6NNA2 597 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 CDX4O14627 284 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 TOP3BO95985 862 aaKnown RBP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 MT-CYBP00156 380 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 FGF1P05230 155 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 ADRB1P08588 477 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 TYRP14679 529 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 KCNA4P22459 653 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 ADRA1AP35348 466 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 EIF2DP41214 584 aaKnown RBP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 P2RY2P41231 377 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 GRIA1P42261 906 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 SGSHP51688 502 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 SLC18A1P54219 525 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 MRPS21P82921 87 aaKnown RBP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 SLC20A2Q08357 652 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 NSUN2Q08J23 767 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 MTM1Q13496 603 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 SKIDA1Q1XH10 827 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 UBAP2Q5T6F2 1119 aaKnown RBP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 STPG1Q5TH74 334 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 FYB2Q5VWT5 728 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 TMEM215Q68D42 235 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 RNF43Q68DV7 783 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 RANBP10Q6VN20 620 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 MARK2Q7KZI7 788 aaKnown RBP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 TMEM135Q86UB9 458 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 IGDCC3Q8IVU1 814 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 CTAGE3PQ8IX95 158 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBFD1-203ENST00000564106 SPATA22Q8NHS9 363 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 FIBINQ8TAL6 211 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 PEX13Q92968 403 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 TADA1Q96BN2 335 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 MYEOVQ96EZ4 313 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 IFT43Q96FT9 208 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 CERS2Q96G23 380 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 LOXL4Q96JB6 756 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 RANBP9Q96S59 729 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 SMC6Q96SB8 1091 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 FEM1AQ9BSK4 669 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 FICDQ9BVA6 458 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 CACNA2D2Q9NY47 1150 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 MOCS1Q9NZB8 636 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 UBP1Q9NZI7 540 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 MARK1Q9P0L2 795 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 ZFATQ9P243 1243 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 TBK1Q9UHD2 729 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 WDFY3Q8IZQ1 3526 aa9.81□□□□□ -0.84
UBFD1-203ENST00000564106 MYLKQ15746 1914 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 TBC1D3BA6NDS4 549 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 C4orf47A7E2U8 309 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 SHOX2O60902 331 aaPredicted RBP9.8□□□□□ -0.84
UBFD1-203ENST00000564106 USP12O75317 370 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 PMPCBO75439 489 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 NDUFV2P19404 249 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 ADRA1DP25100 572 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 GCAP28676 217 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 MDH1P40925 334 aaKnown RBP9.8□□□□□ -0.84
UBFD1-203ENST00000564106 CD86P42081 329 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 SERPINH1P50454 418 aaKnown RBP9.8□□□□□ -0.84
UBFD1-203ENST00000564106 PLK1P53350 603 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 WNT3AP56704 352 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 IRX4P78413 519 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 SULT2A1Q06520 285 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 MGAT5Q09328 741 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 DNAJC3Q13217 504 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 SPARCL1Q14515 664 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 TERF2Q15554 542 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 GEN1Q17RS7 908 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 N4BP2L1Q5TBK1 243 aaPredicted RBP9.8□□□□□ -0.84
UBFD1-203ENST00000564106 PDPK2PQ6A1A2 396 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 KDELC1Q6UW63 502 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 PRPF39Q86UA1 669 aaKnown RBP9.8□□□□□ -0.84
UBFD1-203ENST00000564106 TRABD2AQ86V40 505 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 EXOC3L1Q86VI1 746 aa9.8□□□□□ -0.84
UBFD1-203ENST00000564106 SLC41A1Q8IVJ1 513 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms