RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CFAP69A5D8W1 941 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 RRP8O43159 456 aaKnown RBP17.73■□□□□ 0.43
NME3-205ENST00000563854 CBFA2T2O43439 604 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 TNFP01375 233 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 HOXB3P14651 431 aaPredicted RBP17.73■□□□□ 0.43
NME3-205ENST00000563854 CR2P20023 1033 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 ITPKBP27987 946 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 VIPR1P32241 457 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 ACTN2P35609 894 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 DPYSL3Q14195 570 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 GKN2Q86XP6 184 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 OR1E3Q8WZA6 343 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 NAT6Q93015 286 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 FUBP1Q96AE4 644 aaKnown RBP17.73■□□□□ 0.43
NME3-205ENST00000563854 NUS1Q96E22 293 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 CCDC3Q9BQI4 270 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 WDR26Q9H7D7 661 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 FGF22Q9HCT0 170 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 MRPL40Q9NQ50 206 aaKnown RBP17.73■□□□□ 0.43
NME3-205ENST00000563854 RCOR3Q9P2K3 495 aaPredicted RBP17.73■□□□□ 0.43
NME3-205ENST00000563854 GPR34Q9UPC5 381 aa17.73■□□□□ 0.43
NME3-205ENST00000563854 TMEM202A6NGA9 273 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 CASC3O15234 703 aaKnown RBP17.72■□□□□ 0.43
NME3-205ENST00000563854 HTRA2O43464 458 aaPredicted RBP17.72■□□□□ 0.43
NME3-205ENST00000563854 PROSCO94903 275 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 H2AFZP0C0S5 128 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 CTPS1P17812 591 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 GM2AP17900 193 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 EIF2S3P41091 472 aaKnown RBP17.72■□□□□ 0.43
NME3-205ENST00000563854 TAS2R40P59535 323 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 KIAA1024LP59773 190 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 CCDC173Q0VFZ6 552 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 PTPRRQ15256 657 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 CNGA3Q16281 694 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 SLC18A3Q16572 532 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 C3orf38Q5JPI3 329 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 NCBP2-AS2Q69YL0 99 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 SPECC1LQ69YQ0 1117 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 RBM44Q6ZP01 1051 aaKnown RBP17.72■□□□□ 0.43
NME3-205ENST00000563854 H2AFVQ71UI9 128 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 PELI3Q8N2H9 469 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 ARL10Q8N8L6 244 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 OR56A4Q8NGH8 313 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 FGF11Q92914 225 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 NAF1Q96HR8 494 aaKnown RBP17.72■□□□□ 0.43
NME3-205ENST00000563854 ZNHIT6Q9NWK9 470 aaKnown RBP17.72■□□□□ 0.43
NME3-205ENST00000563854 UVRAGQ9P2Y5 699 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 NENFQ9UMX5 172 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 LRP4O75096 1905 aa17.72■□□□□ 0.43
NME3-205ENST00000563854 A0A1W2PQ67 120 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 AKR1B10O60218 316 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 HEXIM1O94992 359 aaKnown RBP17.71■□□□□ 0.43
NME3-205ENST00000563854 TPM1P09493 284 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 CYP2A6P11509 494 aaPredicted RBP17.71■□□□□ 0.43
NME3-205ENST00000563854 KELP23276 732 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 IL4RP24394 825 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 NFKBIAP25963 317 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 GARSP41250 739 aaKnown RBP17.71■□□□□ 0.43
NME3-205ENST00000563854 TRIM14Q14142 442 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 ARHGEF7Q14155 803 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 ISXQ2M1V0 245 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 TSR1Q2NL82 804 aaKnown RBP17.71■□□□□ 0.43
NME3-205ENST00000563854 SKOR2Q2VWA4 1001 aaPredicted RBP17.71■□□□□ 0.43
NME3-205ENST00000563854 TBC1D25Q3MII6 688 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 ANKRD20A8PQ5CZ79 823 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 ARMC12Q5T9G4 340 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 FOXR1Q6PIV2 292 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 TAF8Q7Z7C8 310 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 RNF214Q8ND24 703 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 OR8K1Q8NGG5 319 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 SNIP1Q8TAD8 396 aaKnown RBP17.71■□□□□ 0.43
NME3-205ENST00000563854 LRRN4Q8WUT4 740 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 CCDC74AQ96AQ1 378 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 ATXN7L3BQ96GX2 97 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 COQ10AQ96MF6 247 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 SEMA3CQ99985 751 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 LGR4Q9BXB1 951 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 CYP4F12Q9HCS2 524 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 PHTF1Q9UMS5 762 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 URB1O60287 2271 aaKnown RBP17.71■□□□□ 0.43
NME3-205ENST00000563854 LAMA5O15230 3695 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 KNTC1P50748 2209 aa17.71■□□□□ 0.43
NME3-205ENST00000563854 NPIPB15A6NHN6 443 aaPredicted RBP17.7■□□□□ 0.42
NME3-205ENST00000563854 B4DGG1 531 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 PGLSO95336 258 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 LHCGRP22888 699 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 HNRNPH3P31942 346 aaKnown RBP17.7■□□□□ 0.42
NME3-205ENST00000563854 ETV3P41162 512 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 ARSEP51690 589 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 GALNT2Q10471 571 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 SPIDRQ14159 915 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 MESDQ14696 234 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 PNCKQ6P2M8 343 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 USP45Q70EL2 814 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 HSD11B1LQ7Z5J1 315 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 TSPAN33Q86UF1 283 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 MAP7D3Q8IWC1 876 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 TPCN2Q8NHX9 752 aa17.7■□□□□ 0.42
NME3-205ENST00000563854 RBM15Q96T37 977 aaKnown RBP eCLIP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms