RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 WDR45BQ5MNZ6 344 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 ADAM5Q6NVV9 412 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 TADA2BQ86TJ2 420 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 KLHDC8BQ8IXV7 354 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 DSELQ8IZU8 1212 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 NKAPQ8N5F7 415 aaKnown RBP3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 KCNH5Q8NCM2 988 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 AGBL3Q8NEM8 1001 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 OR13A1Q8NGR1 328 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 FBXL8Q96CD0 374 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 ZNF570Q96NI8 536 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 KXD1Q9BQD3 176 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 PYM1Q9BRP8 204 aaKnown RBP3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 PCDHGB3Q9Y5G1 929 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 PDS5AQ29RF7 1337 aaKnown RBP3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 MMP2P08253 660 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 G6PDP11413 515 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 CDH1P12830 882 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 KRT10P13645 584 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 EFNB1P98172 346 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 OS9Q13438 667 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 TAF11Q15544 211 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 CTF1Q16619 201 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 EIF2S3LQ2VIR3 472 aaKnown RBP3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 SGO1Q5FBB7 561 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 MAP3K21Q5TCX8 1036 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 BBS12Q6ZW61 710 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 DSG4Q86SJ6 1040 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 CHERPQ8IWX8 916 aaKnown RBP3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 SPATA5Q8NB90 893 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 TNIP2Q8NFZ5 429 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 BBS10Q8TAM1 723 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 WBP2Q969T9 261 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 BBS4Q96RK4 519 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 HEMGNQ9BXL5 484 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 FBRSL1Q9HCM7 1045 aaKnown RBP3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 ZNF334Q9HCZ1 680 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 MKKSQ9NPJ1 570 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 SCRT2Q9NQ03 307 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 KLHL1Q9NR64 748 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 RCOR1Q9UKL0 485 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 GAB2Q9UQC2 676 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 STON1Q9Y6Q2 735 aa3.28□□□□□ -1.88
HMGB1P33-201ENST00000563485 IFNL4K9M1U5 179 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 ZG16O60844 167 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 TACC1O75410 805 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 TCEA3O75764 348 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 LDHAP00338 332 aaKnown RBP3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 URODP06132 367 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 HEXAP06865 529 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 AGAP20933 346 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 POU1F1P28069 291 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 TMPOP42166 694 aaKnown RBP3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 SEC61BP60468 96 aaKnown RBP3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 IRAK1BP1Q5VVH5 260 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 ATG16L1Q676U5 607 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 FBXO46Q6PJ61 603 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 C19orf48Q6RUI8 117 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 GFRALQ6UXV0 394 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 SLC36A4Q6YBV0 504 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 KRBA2Q6ZNG9 492 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 SLC26A9Q7LBE3 791 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 TMEM219Q86XT9 240 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 DHX40Q8IX18 779 aaKnown RBP3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 SLC35F3Q8IY50 421 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 BEST2Q8NFU1 509 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 DUSP19Q8WTR2 217 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 SLC20A1Q8WUM9 679 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 ARPC5LQ9BPX5 153 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 LBHD1Q9BQE6 289 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 TRMT61BQ9BVS5 477 aaKnown RBP3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 KCNN2Q9H2S1 579 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 MAGEE1Q9HCI5 957 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 ABCF3Q9NUQ8 709 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 TAAR2Q9P1P5 351 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 RALYQ9UKM9 306 aaKnown RBP3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 HSF4Q9ULV5 492 aa3.27□□□□□ -1.89
HMGB1P33-201ENST00000563485 GOLGA6L10A0A0M3HER8 536 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 ASPDHA6ND91 283 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 TEX22C9J3V5 150 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 GALTP07902 379 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 ITGA2P17301 1181 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 S1PR1P21453 382 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 TIMP3P35625 211 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 IL15P40933 162 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 GPD2P43304 727 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 CCR5P51681 352 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 ZNF766Q5HY98 468 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 KCNT1Q5JUK3 1230 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 PLA2G4FQ68DD2 849 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 RGMBQ6NW40 437 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 TMEM81Q6P7N7 255 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 SLC22A25Q6T423 547 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 TAOK1Q7L7X3 1001 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 TDRPQ86YL5 185 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 TMTC1Q8IUR5 882 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 EPHX4Q8IUS5 362 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms