RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 E2F5Q15329 346 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 PREPLQ4J6C6 727 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-202ENST00000563366 HSP90AA5PQ58FG0 334 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 LY6G5CQ5SRR4 150 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 ARMC12Q5T9G4 340 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 ANKRD54Q6NXT1 300 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 NCEH1Q6PIU2 408 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 LINGO4Q6UY18 593 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 DNAJC14Q6Y2X3 702 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-202ENST00000563366 KDELC2Q7Z4H8 507 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 GALNT7Q86SF2 657 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 SRLQ86TD4 932 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 LCA5Q86VQ0 697 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 ATCAYQ86WG3 371 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 TMEM25Q86YD3 366 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 APCDD1Q8J025 514 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 PCDH20Q8N6Y1 951 aaKnown RBP9.75□□□□□ -0.85
UBFD1-202ENST00000563366 OR2AP1Q8NGE2 309 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 ITFG1Q8TB96 612 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 WFDC5Q8TCV5 224 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 STYXQ8WUJ0 223 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 FGF13Q92913 245 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 MFSD3Q96ES6 412 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 HSH2DQ96JZ2 352 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 EXOC2Q96KP1 924 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 RIPOR3Q96MK2 946 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 FCRL3Q96P31 734 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-202ENST00000563366 TRIB3Q96RU7 358 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 RBBP8Q99708 897 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 SMYD2Q9NRG4 433 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 PLK2Q9NYY3 685 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.75□□□□□ -0.85
UBFD1-202ENST00000563366 RAI2Q9Y5P3 530 aa9.75□□□□□ -0.85
UBFD1-202ENST00000563366 ZNF106Q9H2Y7 1883 aaKnown RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 CEP290O15078 2479 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 A0A1W2PNR3 127 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ANKRD66B4E2M5 251 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 COPEO14579 308 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 TYROBPO43914 113 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 SIN3BO75182 1162 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 VAPBO95292 243 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 GLP2RO95838 553 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 CD160O95971 181 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ATP5BP06576 529 aaKnown RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ITGA2BP08514 1039 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ERVK-10P10266 1014 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 POLR2EP19388 210 aaKnown RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 CD70P32970 193 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 CCNFP41002 786 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 MTHFRP42898 656 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 RECQLP46063 649 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 RGRP47804 291 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 DGKGP49619 791 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 EPHB1P54762 984 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ECT2LQ008S8 904 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ACVR1Q04771 509 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 SLC18A2Q05940 514 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 HYAL1Q12794 435 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 GALNT3Q14435 633 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 CBX2Q14781 532 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 EIF4HQ15056 248 aaKnown RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 DHCR24Q15392 516 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 TAF1AQ15573 450 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 FUT11Q495W5 492 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ATAT1Q5SQI0 421 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 TEDDM1Q5T9Z0 273 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 C22orf39Q6P5X5 142 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 GET4Q7L5D6 327 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 GLT6D1Q7Z4J2 308 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 CCDC91Q7Z6B0 441 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 STRA8Q7Z7C7 330 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 KIAA0907Q7Z7F0 614 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 C4orf33Q8N1A6 199 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 PAF1Q8N7H5 531 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 C12orf76Q8N812 135 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 BANPQ8N9N5 519 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 BLOC1S5Q8TDH9 187 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 PTPRN2Q92932 1015 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 LMLNQ96KR4 655 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ZSWIM3Q96MP5 696 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 TRIM56Q9BRZ2 755 aaKnown RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 EPN3Q9H201 632 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 RHOJQ9H4E5 214 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 IGFLR1Q9H665 355 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 RUBCNLQ9H714 662 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ZFP14Q9HCL3 533 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 CDH7Q9ULB5 785 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 CORO1CQ9ULV4 474 aaPredicted RBP9.74□□□□□ -0.85
UBFD1-202ENST00000563366 SLC27A6Q9Y2P4 619 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 WNT6Q9Y6F9 365 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 MYO7AQ13402 2215 aa9.74□□□□□ -0.85
UBFD1-202ENST00000563366 MYOFQ9NZM1 2061 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 A0A1W2PPC1 479 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 A0A1W2PPM1 405 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 GMNCA6NCL1 334 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 EPOPA6NHQ4 379 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 LDB2O43679 373 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 FZD6O60353 706 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms