RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 TRBC1P01850 177 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 ZNF883P0CG24 379 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 THEGLP0DJG4 465 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 RBP3P10745 1247 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 NFKB1P19838 968 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 SDHBP21912 280 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 VIPR1P32241 457 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 ATP5OP48047 213 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 ATXN3P54252 364 aaPredicted RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 C21orf59P57076 290 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 EIF3EP60228 445 aaKnown RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 RPL26P61254 145 aaKnown RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 PTSQ03393 145 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 SLC14A1Q13336 389 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 FZD2Q14332 565 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 PUM1Q14671 1186 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBR1-204ENST00000563239 IRF4Q15306 451 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 RPS6KA1Q15418 735 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 SIX1Q15475 284 aaPredicted RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 SLC14A2Q15849 920 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 QPCTQ16769 361 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 UAP1L1Q3KQV9 507 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 CRTC1Q6UUV9 634 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 KDELC1Q6UW63 502 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 Q6ZSR6 202 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 RFLNAQ6ZTI6 216 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 NYAP1Q6ZVC0 841 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 KANSL1Q7Z3B3 1105 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 HSD11B1LQ7Z5J1 315 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 TECPR1Q7Z6L1 1165 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 ADAT2Q7Z6V5 191 aaKnown RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 PLA2G15Q8NCC3 412 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 SLC35B2Q8TB61 432 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 KLHDC7BQ96G42 594 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 OXNAD1Q96HP4 312 aaPredicted RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 CAMK1GQ96NX5 476 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 FCRL5Q96RD9 977 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 ELF4Q99607 663 aaPredicted RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 PCDH9Q9HC56 1237 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 PNMA8BQ9ULN7 279 aaPredicted RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 RPL26L1Q9UNX3 145 aaKnown RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 SPEGQ15772 3267 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 ASCC3Q8N3C0 2202 aaKnown RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 FASNP49327 2511 aaKnown RBP8.56□□□□□ -1.04
UBR1-204ENST00000563239 TP53BP1Q12888 1972 aaPredicted RBP8.56□□□□□ -1.04
UBR1-204ENST00000563239 LOC285095A0A1B0GVY8 99 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 CAPN8A6NHC0 703 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 GOLGA8CPA6NN73 597 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 USP27XA6NNY8 438 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 A6NNZ2 444 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 F5H423 210 aaPredicted RBP8.56□□□□□ -1.04
UBR1-204ENST00000563239 K7ESM1 405 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 FPGTO14772 594 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 GIPC1O14908 333 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 MTSS1O43312 755 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 NRDCO43847 1150 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 SH3BP5O60239 455 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 PCDHGA12O60330 932 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 CBFA2T3O75081 653 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 NEBLO76041 1014 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 CER1O95813 267 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 ELFN1P0C7U0 828 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 CETN2P41208 172 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 RXRGP48443 463 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 IL9RQ01113 521 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 BNIP3Q12983 259 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 LRRC14Q15048 493 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 CCDC181Q5TID7 509 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 PID1Q7Z2X4 250 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 SLC13A5Q86YT5 568 aaPredicted RBP8.56□□□□□ -1.04
UBR1-204ENST00000563239 CDKL3Q8IVW4 592 aaPredicted RBP8.56□□□□□ -1.04
UBR1-204ENST00000563239 LPCAT1Q8NF37 534 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 TRIM58Q8NG06 486 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 FAM174AQ8TBP5 190 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 SAP25Q8TEE9 199 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 SKA1Q96BD8 255 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 EID2BQ96D98 161 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 ALS2CR12Q96Q35 445 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 LYSMD1Q96S90 227 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 VAT1Q99536 393 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 CARD9Q9H257 536 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 GDF3Q9NR23 364 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 TM7SF3Q9NS93 570 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 HAUS2Q9NVX0 235 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 UBP1Q9NZI7 540 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 KLF15Q9UIH9 416 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 TRHDEQ9UKU6 1024 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 PYCARDQ9ULZ3 195 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 BTBD3Q9Y2F9 522 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 PCDHGB2Q9Y5G2 931 aa8.56□□□□□ -1.04
UBR1-204ENST00000563239 SPTY2D1-AS1A0A0U1RR47 76 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 C5orf60A6NFR6 353 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ANKRD66B4E2M5 251 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 PSMD11O00231 422 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 KCNN4O15554 427 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 LZTS3O60299 673 aaPredicted RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 DFNA5O60443 496 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 MAGEC1O60732 1142 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 PMPCBO75439 489 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 KCNK5O95279 499 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms