RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 BROXQ5VW32 411 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 TMEM53Q6P2H8 277 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 CCDC80Q76M96 950 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 SLC15A4Q8N697 577 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 KIF12Q96FN5 646 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 ZNF347Q96SE7 839 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 NPY6RQ99463 290 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 ZNF639Q9UID6 485 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 OAZ3Q9UMX2 235 aa18.71■□□□□ 0.59
BBS4-204ENST00000562084 GPC6Q9Y625 555 aaPredicted RBP18.71■□□□□ 0.59
BBS4-204ENST00000562084 CROCCQ5TZA2 2017 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 NME4O00746 187 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 DNAJB5O75953 348 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 IQCF3P0C7M6 154 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 GFAPP14136 432 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 GPX3P22352 226 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 RPL10P27635 214 aaKnown RBP18.7■□□□□ 0.58
BBS4-204ENST00000562084 IGBP1P78318 339 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 ADARB1P78563 741 aaKnown RBP18.7■□□□□ 0.58
BBS4-204ENST00000562084 SCAPQ12770 1279 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 CBX2Q14781 532 aaPredicted RBP18.7■□□□□ 0.58
BBS4-204ENST00000562084 DDIASQ8IXT1 998 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 CMTR2Q8IYT2 770 aaKnown RBP18.7■□□□□ 0.58
BBS4-204ENST00000562084 SNX31Q8N9S9 440 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 GABPB2Q8TAK5 448 aaPredicted RBP18.7■□□□□ 0.58
BBS4-204ENST00000562084 TSPEARQ8WU66 669 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 HEXDCQ8WVB3 486 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 OSCP1Q8WVF1 389 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 EFHD2Q96C19 240 aaPredicted RBP18.7■□□□□ 0.58
BBS4-204ENST00000562084 TEKT5Q96M29 485 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 PGLYRP2Q96PD5 576 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 PPP1R2P1Q96PQ5 205 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 PSD2Q9BQI7 771 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 MROQ9BYG7 248 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 PLEKHA5Q9HAU0 1116 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 TRAF6Q9Y4K3 522 aa18.7■□□□□ 0.58
BBS4-204ENST00000562084 CCDC78A2IDD5 438 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 FOXD2O60548 495 aaPredicted RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 F7P08709 466 aaPredicted RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 HNRNPLP14866 589 aaKnown RBP eCLIP18.69■□□□□ 0.58
BBS4-204ENST00000562084 ERCC2P18074 760 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 PAMP19021 973 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 NFKB1P19838 968 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 RFC2P35250 354 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 AASDHQ4L235 1098 aaPredicted RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 LAYNQ6UX15 382 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 KIAA0408Q6ZU52 694 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 CEP97Q8IW35 865 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 SLC15A3Q8IY34 581 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 OR6B3Q8NGW1 331 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 HDAC10Q969S8 669 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 FBXL20Q96IG2 436 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 CPB2Q96IY4 423 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 ZNF641Q96N77 438 aaPredicted RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 ASB2Q96Q27 587 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 OMDQ99983 421 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 MUC3BQ9H195 1237 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 SMARCAD1Q9H4L7 1026 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 IFT80Q9P2H3 777 aaPredicted RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 AAR2Q9Y312 384 aaKnown RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 GRM5P41594 1212 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 GJA8P48165 433 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 TNK2Q07912 1038 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 OXA1LQ15070 435 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 TAF1CQ15572 869 aaPredicted RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 RBM48Q5RL73 367 aaKnown RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 OTUD1Q5VV17 481 aaPredicted RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 SPPL2CQ8IUH8 684 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 PPHLN1Q8NEY8 458 aaKnown RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 WNT8BQ93098 351 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 TSPAN17Q96FV3 270 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 ELMO2Q96JJ3 720 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 TRIM54Q9BYV2 358 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 WDR12Q9GZL7 423 aaKnown RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 RAD21L1Q9H4I0 556 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 NANOGQ9H9S0 305 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 ZFYVE28Q9HCC9 887 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 IGSF5Q9NSI5 407 aa18.69■□□□□ 0.58
BBS4-204ENST00000562084 KIAA1522Q9P206 1035 aaPredicted RBP18.69■□□□□ 0.58
BBS4-204ENST00000562084 TYW5A2RUC4 315 aaKnown RBP18.68■□□□□ 0.58
BBS4-204ENST00000562084 A8MT66 165 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 TMX2-CTNND1H3BSU7 103 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 EI24O14681 340 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 ANGPT2O15123 496 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 CACNG3O60359 315 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 MATN4O95460 622 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 ZNF182P17025 639 aaPredicted RBP18.68■□□□□ 0.58
BBS4-204ENST00000562084 HDCP19113 662 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 CLCN3P51790 818 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 ILF2Q12905 390 aaKnown RBP18.68■□□□□ 0.58
BBS4-204ENST00000562084 SEMA3BQ13214 749 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 NEDD8Q15843 81 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 GALNT18Q6P9A2 607 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 PTRH1Q86Y79 214 aaKnown RBP18.68■□□□□ 0.58
BBS4-204ENST00000562084 FUNDC1Q8IVP5 155 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 ZC3H7AQ8IWR0 971 aaKnown RBP18.68■□□□□ 0.58
BBS4-204ENST00000562084 C7orf31Q8N865 590 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 C2CD4AQ8NCU7 369 aaPredicted RBP18.68■□□□□ 0.58
BBS4-204ENST00000562084 CASP10Q92851 521 aa18.68■□□□□ 0.58
BBS4-204ENST00000562084 PARK7Q99497 189 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms